Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 AC132825.4-202ENST00000578792 434 ntBASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 EIF5AP2-201ENST00000585668 1047 ntBASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 COQ4-204ENST00000608951 781 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 AP001527.2-201ENST00000614441 631 ntBASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDH11XQ9BZA7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 MTHFR-210ENST00000641407 2387 ntBASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 ABHD17AP9-201ENST00000561925 548 ntBASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 CES1P2-201ENST00000566467 1242 ntBASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 RN7SL556P-201ENST00000582856 298 ntBASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH11XQ9BZA7 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 OR2W2P-201ENST00000406313 909 ntBASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 PSAT1P2-201ENST00000426107 972 ntBASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 AC100858.1-201ENST00000514059 1228 ntBASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 SRP14-204ENST00000558720 780 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 AP003392.6-201ENST00000607709 325 ntBASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH11XQ9BZA7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 GOLGA8UP-201ENST00000527159 1755 ntBASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms