Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPAP1Q9BWH6 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.53■□□□□ 0.4
RPAP1Q9BWH6 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPAP1Q9BWH6 AC104784.1-201ENST00000473096 294 ntBASIC17.53■□□□□ 0.4
RPAP1Q9BWH6 NPM1P43-201ENST00000558669 786 ntBASIC17.53■□□□□ 0.4
RPAP1Q9BWH6 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.53■□□□□ 0.4
RPAP1Q9BWH6 AC073352.2-201ENST00000609385 439 ntBASIC17.53■□□□□ 0.4
RPAP1Q9BWH6 COX6A1P2-201ENST00000620597 330 ntBASIC17.53■□□□□ 0.4
RPAP1Q9BWH6 YRDCP1-201ENST00000621419 643 ntBASIC17.53■□□□□ 0.4
RPAP1Q9BWH6 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
RPAP1Q9BWH6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RPAP1Q9BWH6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 AC010327.5-201ENST00000586923 3061 ntBASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 CYP4F23P-201ENST00000593402 1579 ntBASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RPAP1Q9BWH6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 KRT18P36-201ENST00000411618 1276 ntBASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 AC027237.1-201ENST00000560942 655 ntBASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.52■□□□□ 0.39
RPAP1Q9BWH6 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 CICP16-201ENST00000502609 2813 ntBASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 AC144522.1-201ENST00000625111 1658 ntBASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 RN7SL67P-201ENST00000492147 296 ntBASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RPAP1Q9BWH6 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms