Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC022364.1-202ENST00000617468 2409 ntBASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 AC015922.1-201ENST00000421102 1152 ntBASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 RPL13P2-201ENST00000440687 659 ntBASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 KRT18P3-201ENST00000451602 1288 ntBASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 AC003101.2-201ENST00000612557 442 ntBASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 TOMM22P5-201ENST00000416399 439 ntBASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 AL591424.1-201ENST00000442569 1213 ntBASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 AC009078.2-202ENST00000463353 338 ntBASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 KRT18P43-201ENST00000469825 1281 ntBASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 MIR6069-201ENST00000620069 79 ntBASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 AC010536.1-201ENST00000538868 2611 ntBASIC12.75□□□□□ -0.37
LYSMD2Q8IV50 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 MSNP1-201ENST00000511640 1732 ntBASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 LINC01165-201ENST00000445190 1623 ntBASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms