Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDCP2Q5VXM1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDCP2Q5VXM1 TNRC18P2-201ENST00000417666 2714 ntBASIC13.66□□□□□ -0.22
CDCP2Q5VXM1 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDCP2Q5VXM1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDCP2Q5VXM1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDCP2Q5VXM1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
CDCP2Q5VXM1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.66□□□□□ -0.22
CDCP2Q5VXM1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 LINC00265-2P-201ENST00000413372 782 ntBASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 AC006987.1-201ENST00000413610 527 ntBASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 AL021707.6-201ENST00000609212 491 ntBASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 AC244517.3-201ENST00000616254 1235 ntBASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 MIR6746-201ENST00000620971 63 ntBASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDCP2Q5VXM1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CDCP2Q5VXM1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CDCP2Q5VXM1 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 AC067931.2-201ENST00000623655 2003 ntBASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 AC108734.2-201ENST00000420887 1069 ntBASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 FAU-202ENST00000434372 533 ntTSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 IGHV1-12-201ENST00000518307 205 ntBASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 SNORD3B-1-201ENST00000577988 758 ntBASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDCP2Q5VXM1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms