Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGA2P52926 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.23□□□□□ -0.29
HMGA2P52926 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.23□□□□□ -0.29
HMGA2P52926 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.23□□□□□ -0.29
HMGA2P52926 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.23□□□□□ -0.29
HMGA2P52926 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
HMGA2P52926 AL365181.3-201ENST00000605886 3222 ntBASIC13.23□□□□□ -0.29
HMGA2P52926 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HMGA2P52926 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMGA2P52926 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGA2P52926 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGA2P52926 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGA2P52926 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.23□□□□□ -0.29
HMGA2P52926 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
HMGA2P52926 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.23□□□□□ -0.29
HMGA2P52926 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.23□□□□□ -0.29
HMGA2P52926 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.23□□□□□ -0.29
HMGA2P52926 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMGA2P52926 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGA2P52926 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGA2P52926 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.23□□□□□ -0.29
HMGA2P52926 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HMGA2P52926 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGA2P52926 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGA2P52926 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMGA2P52926 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.22□□□□□ -0.29
HMGA2P52926 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.22□□□□□ -0.29
HMGA2P52926 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
HMGA2P52926 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGA2P52926 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGA2P52926 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.22□□□□□ -0.29
HMGA2P52926 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.22□□□□□ -0.29
HMGA2P52926 AC126335.2-201ENST00000623362 4637 ntBASIC13.22□□□□□ -0.29
HMGA2P52926 C8orf49-201ENST00000525043 1968 ntBASIC13.22□□□□□ -0.29
HMGA2P52926 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGA2P52926 AC019294.4-201ENST00000561777 2905 ntBASIC13.22□□□□□ -0.29
HMGA2P52926 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGA2P52926 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HMGA2P52926 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGA2P52926 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.22□□□□□ -0.29
HMGA2P52926 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HMGA2P52926 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.22□□□□□ -0.29
HMGA2P52926 UGT1A2P-201ENST00000454886 866 ntBASIC13.22□□□□□ -0.29
HMGA2P52926 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGA2P52926 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.22□□□□□ -0.29
HMGA2P52926 SERBP1P5-201ENST00000510079 1181 ntBASIC13.22□□□□□ -0.29
HMGA2P52926 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HMGA2P52926 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.22□□□□□ -0.29
HMGA2P52926 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGA2P52926 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.22□□□□□ -0.29
HMGA2P52926 PTP4A1P2-201ENST00000546033 454 ntBASIC13.22□□□□□ -0.29
HMGA2P52926 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.22□□□□□ -0.29
HMGA2P52926 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HMGA2P52926 REXO1L6P-201ENST00000603433 1515 ntBASIC13.22□□□□□ -0.29
HMGA2P52926 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGA2P52926 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 AC005562.1-201ENST00000583030 3219 ntBASIC13.22□□□□□ -0.29
HMGA2P52926 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.22□□□□□ -0.29
HMGA2P52926 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HMGA2P52926 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGA2P52926 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HMGA2P52926 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
HMGA2P52926 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.21□□□□□ -0.29
HMGA2P52926 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms