Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AC006435.4-201ENST00000625037 234 ntBASIC12.9□□□□□ -0.34
LHX2P50458 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.9□□□□□ -0.34
LHX2P50458 AL356737.1-201ENST00000634391 234 ntBASIC12.9□□□□□ -0.34
LHX2P50458 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LHX2P50458 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LHX2P50458 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LHX2P50458 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.9□□□□□ -0.34
LHX2P50458 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LHX2P50458 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LHX2P50458 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LHX2P50458 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.9□□□□□ -0.34
LHX2P50458 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LHX2P50458 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LHX2P50458 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LHX2P50458 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.9□□□□□ -0.35
LHX2P50458 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LHX2P50458 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.89□□□□□ -0.35
LHX2P50458 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LHX2P50458 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.89□□□□□ -0.35
LHX2P50458 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.89□□□□□ -0.35
LHX2P50458 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LHX2P50458 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LHX2P50458 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.89□□□□□ -0.35
LHX2P50458 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.89□□□□□ -0.35
LHX2P50458 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LHX2P50458 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.89□□□□□ -0.35
LHX2P50458 RPSAP15-201ENST00000448168 861 ntBASIC12.89□□□□□ -0.35
LHX2P50458 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.89□□□□□ -0.35
LHX2P50458 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 RN7SL67P-201ENST00000492147 296 ntBASIC12.89□□□□□ -0.35
LHX2P50458 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.89□□□□□ -0.35
LHX2P50458 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.89□□□□□ -0.35
LHX2P50458 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.89□□□□□ -0.35
LHX2P50458 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.89□□□□□ -0.35
LHX2P50458 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LHX2P50458 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.89□□□□□ -0.35
LHX2P50458 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
LHX2P50458 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.89□□□□□ -0.35
LHX2P50458 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.89□□□□□ -0.35
LHX2P50458 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
LHX2P50458 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LHX2P50458 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.89□□□□□ -0.35
LHX2P50458 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
LHX2P50458 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LHX2P50458 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.89□□□□□ -0.35
LHX2P50458 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LHX2P50458 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 KRT18P9-201ENST00000604826 1300 ntBASIC12.88□□□□□ -0.35
LHX2P50458 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 AC012617.1-204ENST00000586340 2305 ntBASIC12.88□□□□□ -0.35
LHX2P50458 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 SNX18-202ENST00000343017 3140 ntBASIC12.88□□□□□ -0.35
LHX2P50458 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms