Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC9.3□□□□□ -0.92
UBE2AP49459 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
UBE2AP49459 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC9.3□□□□□ -0.92
UBE2AP49459 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
UBE2AP49459 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC9.3□□□□□ -0.92
UBE2AP49459 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC9.3□□□□□ -0.92
UBE2AP49459 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC9.3□□□□□ -0.92
UBE2AP49459 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
UBE2AP49459 KLF2P2-201ENST00000416807 1039 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC9.3□□□□□ -0.92
UBE2AP49459 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 AC007969.1-201ENST00000433675 447 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC9.3□□□□□ -0.92
UBE2AP49459 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC9.3□□□□□ -0.92
UBE2AP49459 SPTLC1P1-201ENST00000447199 261 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC9.3□□□□□ -0.92
UBE2AP49459 ENPP7P5-201ENST00000541031 1031 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 AP001063.1-201ENST00000568332 529 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 AC009486.1-201ENST00000569860 813 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 AC140912.1-201ENST00000577171 1054 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC9.3□□□□□ -0.92
UBE2AP49459 LINC02560-201ENST00000596379 459 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 TMEM261P1-201ENST00000604899 340 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 AC004790.1-201ENST00000612686 536 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 MIR8072-201ENST00000614241 80 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC9.3□□□□□ -0.92
UBE2AP49459 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
UBE2AP49459 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC9.3□□□□□ -0.92
UBE2AP49459 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
UBE2AP49459 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
UBE2AP49459 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
UBE2AP49459 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC9.3□□□□□ -0.92
UBE2AP49459 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
UBE2AP49459 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
UBE2AP49459 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 KRT8P35-201ENST00000483942 1338 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC9.3□□□□□ -0.92
UBE2AP49459 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
UBE2AP49459 SALL4P5-201ENST00000419001 1760 ntBASIC9.29□□□□□ -0.92
UBE2AP49459 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC9.29□□□□□ -0.92
UBE2AP49459 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC9.29□□□□□ -0.92
UBE2AP49459 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
UBE2AP49459 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC9.29□□□□□ -0.92
UBE2AP49459 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
UBE2AP49459 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
UBE2AP49459 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC9.29□□□□□ -0.92
UBE2AP49459 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 TMEM59-201ENST00000234831 6691 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
UBE2AP49459 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
UBE2AP49459 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
UBE2AP49459 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
UBE2AP49459 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC9.29□□□□□ -0.92
UBE2AP49459 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC9.29□□□□□ -0.92
UBE2AP49459 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC9.29□□□□□ -0.92
UBE2AP49459 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC9.29□□□□□ -0.92
UBE2AP49459 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC9.29□□□□□ -0.92
UBE2AP49459 CALY-202ENST00000368555 783 ntTSL 2 BASIC9.29□□□□□ -0.92
UBE2AP49459 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
UBE2AP49459 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
UBE2AP49459 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UBE2AP49459 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms