Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GGA3-205ENST00000578348 2251 ntTSL 2 BASIC9.39□□□□□ -0.91
PCP4P48539 ANGEL2-202ENST00000366962 4649 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 MICU1-211ENST00000635239 2215 ntTSL 5 BASIC9.39□□□□□ -0.91
PCP4P48539 MICU1-212ENST00000642044 2221 ntBASIC9.39□□□□□ -0.91
PCP4P48539 HSPA8P7-201ENST00000443628 1948 ntBASIC9.39□□□□□ -0.91
PCP4P48539 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 COL5A2-201ENST00000374866 6949 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 ITGA7-206ENST00000553804 3935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 ABL2-211ENST00000512653 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC9.39□□□□□ -0.91
PCP4P48539 CES2-202ENST00000417689 3868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 MATN2-201ENST00000254898 4106 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
PCP4P48539 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC9.39□□□□□ -0.91
PCP4P48539 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC9.39□□□□□ -0.91
PCP4P48539 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC9.39□□□□□ -0.91
PCP4P48539 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 FAM71A-201ENST00000294829 2305 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
PCP4P48539 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
PCP4P48539 ACIN1-223ENST00000605057 4474 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 ZNRD1ASP-219ENST00000448093 2296 ntTSL 2 BASIC9.39□□□□□ -0.91
PCP4P48539 CACNA2D4-202ENST00000382722 5475 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 NPAS3-205ENST00000547068 2531 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC9.39□□□□□ -0.91
PCP4P48539 AL133367.1-201ENST00000568177 4063 ntBASIC9.39□□□□□ -0.91
PCP4P48539 AL136982.1-201ENST00000444431 4560 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 AL391421.1-201ENST00000372387 1922 ntTSL 2 BASIC9.39□□□□□ -0.91
PCP4P48539 SLA-203ENST00000427060 1914 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 TUBD1-216ENST00000613721 2184 ntTSL 5 BASIC9.39□□□□□ -0.91
PCP4P48539 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
PCP4P48539 CAPN3-205ENST00000357568 2669 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 SEC61A1-201ENST00000243253 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 AC139712.1-201ENST00000378256 1875 ntBASIC9.38□□□□□ -0.91
PCP4P48539 FCAMR-203ENST00000400962 1898 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 KCNE1B-203ENST00000622690 3149 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 GPRASP2-204ENST00000535209 3847 ntAPPRIS P1 TSL 4 BASIC9.38□□□□□ -0.91
PCP4P48539 CCDC170-201ENST00000239374 5293 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 DUOX1-211ENST00000561166 4539 ntTSL 2 BASIC9.38□□□□□ -0.91
PCP4P48539 TCF20-201ENST00000335626 6237 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 AC130365.1-201ENST00000530524 1553 ntBASIC9.38□□□□□ -0.91
PCP4P48539 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 NKIRAS1-205ENST00000421515 2018 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
PCP4P48539 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 WDR62-201ENST00000270301 4632 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 CPT1A-206ENST00000540367 2496 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC9.38□□□□□ -0.91
PCP4P48539 TBX22-201ENST00000373294 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC9.38□□□□□ -0.91
PCP4P48539 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
PCP4P48539 MBTPS1-201ENST00000343411 4338 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 SALL4-201ENST00000217086 5208 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
PCP4P48539 LY6E-213ENST00000522528 606 ntTSL 3 BASIC9.38□□□□□ -0.91
PCP4P48539 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC9.38□□□□□ -0.91
PCP4P48539 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC9.38□□□□□ -0.91
PCP4P48539 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 FUT6-202ENST00000318336 3137 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
PCP4P48539 IGSF3-203ENST00000369486 7254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC9.38□□□□□ -0.91
PCP4P48539 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 LINC02211-203ENST00000642022 2816 ntBASIC9.38□□□□□ -0.91
PCP4P48539 ICAM1-201ENST00000264832 3252 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 EXOC7-221ENST00000634349 2124 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 AC091167.8-201ENST00000641199 3441 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
PCP4P48539 DIAPH1-211ENST00000518047 4668 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 TRAF3IP2-202ENST00000359831 2264 ntAPPRIS ALT1 TSL 2 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms