RNA–Protein interactions for RNA: ENST00000553804.5

ITGA7-206, Transcript of integrin subunit alpha 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGA7, Length 3,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-206ENST00000553804 NISCHQ9Y2I1 1504 aa19.56■□□□□ 0.72
ITGA7-206ENST00000553804 SUPT5HO00267 1087 aaKnown RBP17.51■□□□□ 0.39
ITGA7-206ENST00000553804 PCGF6Q9BYE7 350 aa17.39■□□□□ 0.37
ITGA7-206ENST00000553804 SHROOM4Q9ULL8 1493 aa17.33■□□□□ 0.37
ITGA7-206ENST00000553804 DCAF8L2P0C7V8 631 aa17.28■□□□□ 0.36
ITGA7-206ENST00000553804 PPARGC1BQ86YN6 1023 aaKnown RBP17.27■□□□□ 0.35
ITGA7-206ENST00000553804 HRCP23327 699 aa17.24■□□□□ 0.35
ITGA7-206ENST00000553804 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
ITGA7-206ENST00000553804 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
ITGA7-206ENST00000553804 EHMT2Q96KQ7 1210 aa16.75■□□□□ 0.27
ITGA7-206ENST00000553804 MYT1Q01538 1121 aa16.69■□□□□ 0.26
ITGA7-206ENST00000553804 LOC105371045A0A1W2PR82 267 aa16.57■□□□□ 0.24
ITGA7-206ENST00000553804 ABCC9O60706 1549 aa16.53■□□□□ 0.24
ITGA7-206ENST00000553804 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.24
ITGA7-206ENST00000553804 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
ITGA7-206ENST00000553804 FAM9AQ8IZU1 332 aaPredicted RBP16.41■□□□□ 0.22
ITGA7-206ENST00000553804 TRIM26Q12899 539 aaPredicted RBP16.39■□□□□ 0.21
ITGA7-206ENST00000553804 ZCCHC6Q5VYS8 1495 aaKnown RBP16.36■□□□□ 0.21
ITGA7-206ENST00000553804 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
ITGA7-206ENST00000553804 TTBK1Q5TCY1 1321 aaPredicted RBP16.29■□□□□ 0.2
ITGA7-206ENST00000553804 YTHDC1Q96MU7 727 aaKnown RBP16.28■□□□□ 0.2
ITGA7-206ENST00000553804 CENPBP07199 599 aaPredicted RBP16.26■□□□□ 0.19
ITGA7-206ENST00000553804 GTF3C3Q9Y5Q9 886 aa16.22■□□□□ 0.19
ITGA7-206ENST00000553804 MYO15BQ96JP2 1530 aa16.21■□□□□ 0.19
ITGA7-206ENST00000553804 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
ITGA7-206ENST00000553804 NEUROD1Q13562 356 aa16.08■□□□□ 0.16
ITGA7-206ENST00000553804 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
ITGA7-206ENST00000553804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.05■□□□□ 0.16
ITGA7-206ENST00000553804 DIEXFQ68CQ4 756 aaKnown RBP15.96■□□□□ 0.15
ITGA7-206ENST00000553804 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
ITGA7-206ENST00000553804 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
ITGA7-206ENST00000553804 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
ITGA7-206ENST00000553804 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
ITGA7-206ENST00000553804 NACADO15069 1562 aa15.79■□□□□ 0.12
ITGA7-206ENST00000553804 RB1CC1Q8TDY2 1594 aa15.75■□□□□ 0.11
ITGA7-206ENST00000553804 BCANQ96GW7 911 aa15.51■□□□□ 0.07
ITGA7-206ENST00000553804 RANGAP1P46060 587 aaPredicted RBP15.5■□□□□ 0.07
ITGA7-206ENST00000553804 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
ITGA7-206ENST00000553804 ZNF316A6NFI3 1004 aaPredicted RBP15.47■□□□□ 0.07
ITGA7-206ENST00000553804 RSF1Q96T23 1441 aaPredicted RBP15.46■□□□□ 0.07
ITGA7-206ENST00000553804 MIER1Q8N108 512 aa15.44■□□□□ 0.06
ITGA7-206ENST00000553804 ERICH6Q7L0X2 663 aa15.4■□□□□ 0.06
ITGA7-206ENST00000553804 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
ITGA7-206ENST00000553804 UBTFP17480 764 aaKnown RBP15.38■□□□□ 0.05
ITGA7-206ENST00000553804 BCL11AQ9H165 835 aa15.37■□□□□ 0.05
ITGA7-206ENST00000553804 APLP2Q06481 763 aa15.33■□□□□ 0.04
ITGA7-206ENST00000553804 NEFLP07196 543 aa15.25■□□□□ 0.03
ITGA7-206ENST00000553804 ANP32EQ9BTT0 268 aa15.24■□□□□ 0.03
ITGA7-206ENST00000553804 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
ITGA7-206ENST00000553804 UNC13AQ9UPW8 1703 aa15.22■□□□□ 0.03
ITGA7-206ENST00000553804 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
ITGA7-206ENST00000553804 BICRAQ9NZM4 1560 aa15.14■□□□□ 0.01
ITGA7-206ENST00000553804 SUPT16HQ9Y5B9 1047 aaKnown RBP15.13■□□□□ 0.01
ITGA7-206ENST00000553804 WIZO95785 1651 aa15.12■□□□□ 0.01
ITGA7-206ENST00000553804 BAZ1AQ9NRL2 1556 aaPredicted RBP15.12■□□□□ 0.01
ITGA7-206ENST00000553804 ITGAEP38570 1179 aa15.11■□□□□ 0.01
ITGA7-206ENST00000553804 FKBP8Q14318 412 aa15.11■□□□□ 0.01
ITGA7-206ENST00000553804 TSHZ2Q9NRE2 1034 aa15.06■□□□□ 0
ITGA7-206ENST00000553804 SMARCA4P51532 1647 aa15□□□□□ -0.01
ITGA7-206ENST00000553804 CLSPNQ9HAW4 1339 aa14.99□□□□□ -0.01
ITGA7-206ENST00000553804 TRIM52Q96A61 297 aa14.92□□□□□ -0.02
ITGA7-206ENST00000553804 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
ITGA7-206ENST00000553804 IRX6P78412 446 aaPredicted RBP14.88□□□□□ -0.03
ITGA7-206ENST00000553804 CCDC88BA6NC98 1476 aa14.88□□□□□ -0.03
ITGA7-206ENST00000553804 CNGB1Q14028 1251 aaPredicted RBP14.86□□□□□ -0.03
ITGA7-206ENST00000553804 ATAD2BQ9ULI0 1458 aa14.85□□□□□ -0.03
ITGA7-206ENST00000553804 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
ITGA7-206ENST00000553804 NBR1Q14596 966 aa14.84□□□□□ -0.03
ITGA7-206ENST00000553804 DDX10Q13206 875 aaKnown RBP14.84□□□□□ -0.03
ITGA7-206ENST00000553804 RBM19Q9Y4C8 960 aaKnown RBP14.84□□□□□ -0.03
ITGA7-206ENST00000553804 EIF4G1Q04637 1599 aaKnown RBP14.84□□□□□ -0.03
ITGA7-206ENST00000553804 CDK11AQ9UQ88 783 aaPredicted RBP14.82□□□□□ -0.04
ITGA7-206ENST00000553804 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
ITGA7-206ENST00000553804 HIRIP3Q9BW71 556 aaPredicted RBP14.81□□□□□ -0.04
ITGA7-206ENST00000553804 TOP2AP11388 1531 aaKnown RBP14.81□□□□□ -0.04
ITGA7-206ENST00000553804 ATP1B4Q9UN42 357 aaPredicted RBP14.79□□□□□ -0.04
ITGA7-206ENST00000553804 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
ITGA7-206ENST00000553804 RTL5Q5HYW3 569 aaPredicted RBP14.73□□□□□ -0.05
ITGA7-206ENST00000553804 SOGA1O94964 1423 aa14.72□□□□□ -0.05
ITGA7-206ENST00000553804 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.05
ITGA7-206ENST00000553804 RTN4Q9NQC3 1192 aaKnown RBP14.7□□□□□ -0.06
ITGA7-206ENST00000553804 ANP32CO43423 234 aa14.69□□□□□ -0.06
ITGA7-206ENST00000553804 CEP162Q5TB80 1403 aa14.68□□□□□ -0.06
ITGA7-206ENST00000553804 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
ITGA7-206ENST00000553804 CC2D2AQ9P2K1 1620 aa14.66□□□□□ -0.06
ITGA7-206ENST00000553804 DEKP35659 375 aaKnown RBP14.63□□□□□ -0.07
ITGA7-206ENST00000553804 HNRNPUQ00839 825 aaKnown RBP eCLIP14.63□□□□□ -0.07
ITGA7-206ENST00000553804 EIF5BO60841 1220 aaKnown RBP14.63□□□□□ -0.07
ITGA7-206ENST00000553804 DNAJC5BQ9UF47 199 aa14.62□□□□□ -0.07
ITGA7-206ENST00000553804 NCAPD3P42695 1498 aa14.62□□□□□ -0.07
ITGA7-206ENST00000553804 RUSC2Q8N2Y8 1516 aa14.62□□□□□ -0.07
ITGA7-206ENST00000553804 CCDC136Q96JN2 1154 aa14.57□□□□□ -0.08
ITGA7-206ENST00000553804 POLR3GLQ9BT43 218 aa14.57□□□□□ -0.08
ITGA7-206ENST00000553804 NPM2Q86SE8 214 aaKnown RBP14.57□□□□□ -0.08
ITGA7-206ENST00000553804 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
ITGA7-206ENST00000553804 FAM50AQ14320 339 aaKnown RBP14.56□□□□□ -0.08
ITGA7-206ENST00000553804 MYT1LQ9UL68 1186 aa14.55□□□□□ -0.08
ITGA7-206ENST00000553804 SENP3-EIF4A1A0A087X0R7 540 aa14.54□□□□□ -0.08
ITGA7-206ENST00000553804 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.52□□□□□ -0.08
ITGA7-206ENST00000553804 ANO8Q9HCE9 1232 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms