RNA–Protein interactions for RNA: ENST00000327702.11

CACNA1C-201, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-201ENST00000327702 DCAF8L2P0C7V8 631 aa18.2■□□□□ 0.5
CACNA1C-201ENST00000327702 PELP1Q8IZL8 1130 aaKnown RBP17.78■□□□□ 0.44
CACNA1C-201ENST00000327702 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
CACNA1C-201ENST00000327702 SUPT5HO00267 1087 aaKnown RBP17.1■□□□□ 0.33
CACNA1C-201ENST00000327702 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
CACNA1C-201ENST00000327702 CCER1Q8TC90 406 aaPredicted RBP16.97■□□□□ 0.31
CACNA1C-201ENST00000327702 APLP2Q06481 763 aa16.92■□□□□ 0.3
CACNA1C-201ENST00000327702 FAM9AQ8IZU1 332 aaPredicted RBP16.81■□□□□ 0.28
CACNA1C-201ENST00000327702 CENPBP07199 599 aaPredicted RBP16.64■□□□□ 0.25
CACNA1C-201ENST00000327702 NISCHQ9Y2I1 1504 aa16.58■□□□□ 0.25
CACNA1C-201ENST00000327702 SHROOM4Q9ULL8 1493 aa16.55■□□□□ 0.24
CACNA1C-201ENST00000327702 MYT1Q01538 1121 aa16.55■□□□□ 0.24
CACNA1C-201ENST00000327702 TTBK1Q5TCY1 1321 aaPredicted RBP16.47■□□□□ 0.23
CACNA1C-201ENST00000327702 NEFLP07196 543 aa16.45■□□□□ 0.22
CACNA1C-201ENST00000327702 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
CACNA1C-201ENST00000327702 ZEB1P37275 1124 aaPredicted RBP16.31■□□□□ 0.2
CACNA1C-201ENST00000327702 DAXXQ9UER7 740 aaPredicted RBP16.26■□□□□ 0.19
CACNA1C-201ENST00000327702 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
CACNA1C-201ENST00000327702 RANGAP1P46060 587 aaPredicted RBP16.19■□□□□ 0.18
CACNA1C-201ENST00000327702 YTHDC1Q96MU7 727 aaKnown RBP16.16■□□□□ 0.18
CACNA1C-201ENST00000327702 MYT1LQ9UL68 1186 aa15.98■□□□□ 0.15
CACNA1C-201ENST00000327702 UBTFP17480 764 aaKnown RBP15.85■□□□□ 0.13
CACNA1C-201ENST00000327702 ZNF316A6NFI3 1004 aaPredicted RBP15.84■□□□□ 0.13
CACNA1C-201ENST00000327702 TRIM41Q8WV44 630 aa15.82■□□□□ 0.12
CACNA1C-201ENST00000327702 POLR3GLQ9BT43 218 aa15.82■□□□□ 0.12
CACNA1C-201ENST00000327702 RTL5Q5HYW3 569 aaPredicted RBP15.79■□□□□ 0.12
CACNA1C-201ENST00000327702 CHIC1Q5VXU3 224 aa15.76■□□□□ 0.11
CACNA1C-201ENST00000327702 CLSPNQ9HAW4 1339 aa15.69■□□□□ 0.1
CACNA1C-201ENST00000327702 SLC4A1APQ9BWU0 796 aaKnown RBP15.68■□□□□ 0.1
CACNA1C-201ENST00000327702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
CACNA1C-201ENST00000327702 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
CACNA1C-201ENST00000327702 CNGB1Q14028 1251 aaPredicted RBP15.59■□□□□ 0.09
CACNA1C-201ENST00000327702 PPARGC1BQ86YN6 1023 aaKnown RBP15.53■□□□□ 0.08
CACNA1C-201ENST00000327702 ITGAEP38570 1179 aa15.51■□□□□ 0.07
CACNA1C-201ENST00000327702 TRIM26Q12899 539 aaPredicted RBP15.44■□□□□ 0.06
CACNA1C-201ENST00000327702 ZBTB47Q9UFB7 747 aaPredicted RBP15.42■□□□□ 0.06
CACNA1C-201ENST00000327702 HRCP23327 699 aa15.37■□□□□ 0.05
CACNA1C-201ENST00000327702 BCL11AQ9H165 835 aa15.31■□□□□ 0.04
CACNA1C-201ENST00000327702 SLC24A1O60721 1099 aa15.31■□□□□ 0.04
CACNA1C-201ENST00000327702 CDK11AQ9UQ88 783 aaPredicted RBP15.23■□□□□ 0.03
CACNA1C-201ENST00000327702 CANXP27824 592 aaKnown RBP15.18■□□□□ 0.02
CACNA1C-201ENST00000327702 BCANQ96GW7 911 aa15.16■□□□□ 0.02
CACNA1C-201ENST00000327702 DIEXFQ68CQ4 756 aaKnown RBP15.15■□□□□ 0.02
CACNA1C-201ENST00000327702 ANP32BQ92688 251 aaKnown RBP15.11■□□□□ 0.01
CACNA1C-201ENST00000327702 TRIM52Q96A61 297 aa15.1■□□□□ 0.01
CACNA1C-201ENST00000327702 NEFMP07197 916 aa15.06■□□□□ 0
CACNA1C-201ENST00000327702 FAM50AQ14320 339 aaKnown RBP15.06■□□□□ 0
CACNA1C-201ENST00000327702 ANP32CO43423 234 aa15.05■□□□□ 0
CACNA1C-201ENST00000327702 ANP32AP39687 249 aaKnown RBP15.05■□□□□ -0
CACNA1C-201ENST00000327702 GLIPR1L2Q4G1C9 344 aa15.03■□□□□ -0
CACNA1C-201ENST00000327702 EIF5BO60841 1220 aaKnown RBP15.03■□□□□ -0
CACNA1C-201ENST00000327702 NEUROD1Q13562 356 aa15.01□□□□□ -0.01
CACNA1C-201ENST00000327702 ZNF326Q5BKZ1 582 aaKnown RBP14.96□□□□□ -0.01
CACNA1C-201ENST00000327702 NPM2Q86SE8 214 aaKnown RBP14.94□□□□□ -0.02
CACNA1C-201ENST00000327702 GTF3C3Q9Y5Q9 886 aa14.93□□□□□ -0.02
CACNA1C-201ENST00000327702 HSP90AA1P07900 732 aaKnown RBP14.92□□□□□ -0.02
CACNA1C-201ENST00000327702 LOC105371045A0A1W2PR82 267 aa14.86□□□□□ -0.03
CACNA1C-201ENST00000327702 CDK11BP21127 795 aaKnown RBP14.84□□□□□ -0.03
CACNA1C-201ENST00000327702 UPF2Q9HAU5 1272 aaKnown RBP14.82□□□□□ -0.04
CACNA1C-201ENST00000327702 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
CACNA1C-201ENST00000327702 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
CACNA1C-201ENST00000327702 ESF1Q9H501 851 aaKnown RBP14.74□□□□□ -0.05
CACNA1C-201ENST00000327702 TULP1O00294 542 aaPredicted RBP14.71□□□□□ -0.05
CACNA1C-201ENST00000327702 FBLN2P98095 1184 aa14.7□□□□□ -0.06
CACNA1C-201ENST00000327702 A0A0G2JS52 829 aa14.67□□□□□ -0.06
CACNA1C-201ENST00000327702 ARXQ96QS3 562 aa14.64□□□□□ -0.07
CACNA1C-201ENST00000327702 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
CACNA1C-201ENST00000327702 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
CACNA1C-201ENST00000327702 NBR1Q14596 966 aa14.59□□□□□ -0.07
CACNA1C-201ENST00000327702 FKBP8Q14318 412 aa14.58□□□□□ -0.08
CACNA1C-201ENST00000327702 ACIN1Q9UKV3 1341 aaKnown RBP14.57□□□□□ -0.08
CACNA1C-201ENST00000327702 TNNT2P45379 298 aaPredicted RBP14.56□□□□□ -0.08
CACNA1C-201ENST00000327702 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.56□□□□□ -0.08
CACNA1C-201ENST00000327702 NCLP19338 710 aaKnown RBP14.53□□□□□ -0.08
CACNA1C-201ENST00000327702 CHGAP10645 457 aaKnown RBP14.51□□□□□ -0.09
CACNA1C-201ENST00000327702 MYH16Q9H6N6 1097 aa14.5□□□□□ -0.09
CACNA1C-201ENST00000327702 TRIM44Q96DX7 344 aaPredicted RBP14.5□□□□□ -0.09
CACNA1C-201ENST00000327702 ZNF777Q9ULD5 760 aaPredicted RBP14.47□□□□□ -0.09
CACNA1C-201ENST00000327702 CCDC136Q96JN2 1154 aa14.46□□□□□ -0.09
CACNA1C-201ENST00000327702 HNRNPUQ00839 825 aaKnown RBP eCLIP14.45□□□□□ -0.1
CACNA1C-201ENST00000327702 FAM9BQ8IZU0 186 aa14.45□□□□□ -0.1
CACNA1C-201ENST00000327702 PLEKHG5O94827 1062 aa14.44□□□□□ -0.1
CACNA1C-201ENST00000327702 ARID3CA6NKF2 412 aa14.44□□□□□ -0.1
CACNA1C-201ENST00000327702 SALL2Q9Y467 1007 aaPredicted RBP14.43□□□□□ -0.1
CACNA1C-201ENST00000327702 ZBTB7CA1YPR0 619 aa14.43□□□□□ -0.1
CACNA1C-201ENST00000327702 WDR43Q15061 677 aaKnown RBP eCLIP14.42□□□□□ -0.1
CACNA1C-201ENST00000327702 ZRSR1Q15695 479 aaKnown RBP14.42□□□□□ -0.1
CACNA1C-201ENST00000327702 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
CACNA1C-201ENST00000327702 BECN1Q14457 450 aa14.41□□□□□ -0.1
CACNA1C-201ENST00000327702 DDRGK1Q96HY6 314 aa14.41□□□□□ -0.1
CACNA1C-201ENST00000327702 ANP32EQ9BTT0 268 aa14.41□□□□□ -0.1
CACNA1C-201ENST00000327702 GOLGA6L22H0YM25 854 aa14.4□□□□□ -0.1
CACNA1C-201ENST00000327702 PTMAP06454 111 aaKnown RBP14.4□□□□□ -0.1
CACNA1C-201ENST00000327702 ABCC9O60706 1549 aa14.4□□□□□ -0.1
CACNA1C-201ENST00000327702 TONSLQ96HA7 1378 aa14.38□□□□□ -0.11
CACNA1C-201ENST00000327702 DNTTIP2Q5QJE6 756 aaKnown RBP14.37□□□□□ -0.11
CACNA1C-201ENST00000327702 TMC1Q8TDI8 760 aa14.36□□□□□ -0.11
CACNA1C-201ENST00000327702 P3H3Q8IVL6 736 aa14.34□□□□□ -0.11
CACNA1C-201ENST00000327702 NPM1P06748 294 aaKnown RBP eCLIP14.31□□□□□ -0.12
CACNA1C-201ENST00000327702 C14orf37Q86TY3 774 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms