RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 NISCHQ9Y2I1 1504 aa25.58■■□□□ 1.69
TUBD1-216ENST00000613721 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
TUBD1-216ENST00000613721 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
TUBD1-216ENST00000613721 CCDC180Q9P1Z9 1646 aa22.01■■□□□ 1.11
TUBD1-216ENST00000613721 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.03
TUBD1-216ENST00000613721 SHROOM4Q9ULL8 1493 aa21.46■■□□□ 1.03
TUBD1-216ENST00000613721 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
TUBD1-216ENST00000613721 ABCC9O60706 1549 aa20.99■□□□□ 0.95
TUBD1-216ENST00000613721 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
TUBD1-216ENST00000613721 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
TUBD1-216ENST00000613721 SCRIBQ14160 1630 aa20.62■□□□□ 0.89
TUBD1-216ENST00000613721 MYO15BQ96JP2 1530 aa20.52■□□□□ 0.88
TUBD1-216ENST00000613721 NACADO15069 1562 aa20.48■□□□□ 0.87
TUBD1-216ENST00000613721 RB1CC1Q8TDY2 1594 aa20.3■□□□□ 0.84
TUBD1-216ENST00000613721 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
TUBD1-216ENST00000613721 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
TUBD1-216ENST00000613721 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
TUBD1-216ENST00000613721 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.79
TUBD1-216ENST00000613721 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
TUBD1-216ENST00000613721 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
TUBD1-216ENST00000613721 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
TUBD1-216ENST00000613721 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
TUBD1-216ENST00000613721 WIZO95785 1651 aa19.78■□□□□ 0.76
TUBD1-216ENST00000613721 BAZ1AQ9NRL2 1556 aaPredicted RBP19.67■□□□□ 0.74
TUBD1-216ENST00000613721 SMARCA4P51532 1647 aa19.63■□□□□ 0.73
TUBD1-216ENST00000613721 LOC105371045A0A1W2PR82 267 aa19.51■□□□□ 0.71
TUBD1-216ENST00000613721 TRIM41Q8WV44 630 aa19.44■□□□□ 0.7
TUBD1-216ENST00000613721 TOP2AP11388 1531 aaKnown RBP19.4■□□□□ 0.7
TUBD1-216ENST00000613721 PCGF6Q9BYE7 350 aa19.37■□□□□ 0.69
TUBD1-216ENST00000613721 HRCP23327 699 aa19.33■□□□□ 0.68
TUBD1-216ENST00000613721 CCDC88BA6NC98 1476 aa19.33■□□□□ 0.68
TUBD1-216ENST00000613721 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
TUBD1-216ENST00000613721 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.68
TUBD1-216ENST00000613721 ATAD2BQ9ULI0 1458 aa19.26■□□□□ 0.67
TUBD1-216ENST00000613721 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
TUBD1-216ENST00000613721 FAM9AQ8IZU1 332 aaPredicted RBP19.19■□□□□ 0.66
TUBD1-216ENST00000613721 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
TUBD1-216ENST00000613721 ABCC8Q09428 1581 aa19.13■□□□□ 0.65
TUBD1-216ENST00000613721 TRIM26Q12899 539 aaPredicted RBP19.12■□□□□ 0.65
TUBD1-216ENST00000613721 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
TUBD1-216ENST00000613721 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
TUBD1-216ENST00000613721 HMGXB3Q12766 1538 aa18.9■□□□□ 0.62
TUBD1-216ENST00000613721 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.61
TUBD1-216ENST00000613721 FOXD1Q16676 465 aa18.85■□□□□ 0.61
TUBD1-216ENST00000613721 PPARGC1BQ86YN6 1023 aaKnown RBP18.85■□□□□ 0.61
TUBD1-216ENST00000613721 SOGA1O94964 1423 aa18.8■□□□□ 0.6
TUBD1-216ENST00000613721 WRNQ14191 1432 aaPredicted RBP eCLIP18.8■□□□□ 0.6
TUBD1-216ENST00000613721 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
TUBD1-216ENST00000613721 RUSC2Q8N2Y8 1516 aa18.78■□□□□ 0.6
TUBD1-216ENST00000613721 EEA1Q15075 1411 aa18.77■□□□□ 0.6
TUBD1-216ENST00000613721 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
TUBD1-216ENST00000613721 ZEB1P37275 1124 aaPredicted RBP18.68■□□□□ 0.58
TUBD1-216ENST00000613721 CEP162Q5TB80 1403 aa18.66■□□□□ 0.58
TUBD1-216ENST00000613721 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
TUBD1-216ENST00000613721 CFTRP13569 1480 aa18.65■□□□□ 0.58
TUBD1-216ENST00000613721 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
TUBD1-216ENST00000613721 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
TUBD1-216ENST00000613721 CUX1P39880 1505 aa18.57■□□□□ 0.56
TUBD1-216ENST00000613721 TOP2BQ02880 1626 aa18.56■□□□□ 0.56
TUBD1-216ENST00000613721 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
TUBD1-216ENST00000613721 KIF21BO75037 1637 aa18.54■□□□□ 0.56
TUBD1-216ENST00000613721 NESP48681 1621 aa18.54■□□□□ 0.56
TUBD1-216ENST00000613721 UBTFP17480 764 aaKnown RBP18.53■□□□□ 0.56
TUBD1-216ENST00000613721 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.56
TUBD1-216ENST00000613721 BIVM-ERCC5R4GMW8 1640 aa18.51■□□□□ 0.55
TUBD1-216ENST00000613721 PRDM2Q13029 1718 aa18.48■□□□□ 0.55
TUBD1-216ENST00000613721 FANCD2Q9BXW9 1451 aa18.4■□□□□ 0.54
TUBD1-216ENST00000613721 RAPGEF2Q9Y4G8 1499 aa18.36■□□□□ 0.53
TUBD1-216ENST00000613721 RANGAP1P46060 587 aaPredicted RBP18.36■□□□□ 0.53
TUBD1-216ENST00000613721 TTBK1Q5TCY1 1321 aaPredicted RBP18.34■□□□□ 0.53
TUBD1-216ENST00000613721 CLIP1P30622 1438 aa18.34■□□□□ 0.53
TUBD1-216ENST00000613721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.31■□□□□ 0.52
TUBD1-216ENST00000613721 FGD5Q6ZNL6 1462 aa18.31■□□□□ 0.52
TUBD1-216ENST00000613721 CCER1Q8TC90 406 aaPredicted RBP18.3■□□□□ 0.52
TUBD1-216ENST00000613721 ERICH3Q5RHP9 1530 aa18.27■□□□□ 0.52
TUBD1-216ENST00000613721 VPS8Q8N3P4 1428 aa18.27■□□□□ 0.52
TUBD1-216ENST00000613721 CUX2O14529 1486 aa18.26■□□□□ 0.51
TUBD1-216ENST00000613721 KIF27Q86VH2 1401 aa18.25■□□□□ 0.51
TUBD1-216ENST00000613721 RAD54L2Q9Y4B4 1467 aa18.24■□□□□ 0.51
TUBD1-216ENST00000613721 LAMC3Q9Y6N6 1575 aa18.24■□□□□ 0.51
TUBD1-216ENST00000613721 PRXQ9BXM0 1461 aa18.23■□□□□ 0.51
TUBD1-216ENST00000613721 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
TUBD1-216ENST00000613721 KIF21AQ7Z4S6 1674 aa18.21■□□□□ 0.5
TUBD1-216ENST00000613721 URB2Q14146 1524 aaKnown RBP18.2■□□□□ 0.5
TUBD1-216ENST00000613721 DNMBPQ6XZF7 1577 aa18.2■□□□□ 0.5
TUBD1-216ENST00000613721 POLA1P09884 1462 aaPredicted RBP18.18■□□□□ 0.5
TUBD1-216ENST00000613721 IGF1RP08069 1367 aa18.14■□□□□ 0.5
TUBD1-216ENST00000613721 PDS5BQ9NTI5 1447 aa18.13■□□□□ 0.49
TUBD1-216ENST00000613721 APLP2Q06481 763 aa18.12■□□□□ 0.49
TUBD1-216ENST00000613721 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
TUBD1-216ENST00000613721 CARMIL1Q5VZK9 1371 aa18.05■□□□□ 0.48
TUBD1-216ENST00000613721 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
TUBD1-216ENST00000613721 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
TUBD1-216ENST00000613721 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
TUBD1-216ENST00000613721 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
TUBD1-216ENST00000613721 ARHGAP35Q9NRY4 1499 aa17.94■□□□□ 0.46
TUBD1-216ENST00000613721 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
TUBD1-216ENST00000613721 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
TUBD1-216ENST00000613721 TARBP1Q13395 1621 aaKnown RBP17.91■□□□□ 0.46
TUBD1-216ENST00000613721 ABCA5Q8WWZ7 1642 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms