RNA–Protein interactions for RNA: ENST00000217086.8

SALL4-201, Transcript of spalt like transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SALL4, Length 5,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4-201ENST00000217086 DCAF8L2P0C7V8 631 aa19.81■□□□□ 0.76
SALL4-201ENST00000217086 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
SALL4-201ENST00000217086 NISCHQ9Y2I1 1504 aa18.46■□□□□ 0.55
SALL4-201ENST00000217086 SHROOM4Q9ULL8 1493 aa18.34■□□□□ 0.53
SALL4-201ENST00000217086 EHMT2Q96KQ7 1210 aa18.22■□□□□ 0.51
SALL4-201ENST00000217086 PELP1Q8IZL8 1130 aaKnown RBP18.04■□□□□ 0.48
SALL4-201ENST00000217086 APLP2Q06481 763 aa18■□□□□ 0.47
SALL4-201ENST00000217086 FAM9AQ8IZU1 332 aaPredicted RBP17.75■□□□□ 0.43
SALL4-201ENST00000217086 TTBK1Q5TCY1 1321 aaPredicted RBP17.62■□□□□ 0.41
SALL4-201ENST00000217086 PCGF6Q9BYE7 350 aa17.55■□□□□ 0.4
SALL4-201ENST00000217086 RANGAP1P46060 587 aaPredicted RBP17.44■□□□□ 0.38
SALL4-201ENST00000217086 TRIM41Q8WV44 630 aa17.4■□□□□ 0.38
SALL4-201ENST00000217086 CENPBP07199 599 aaPredicted RBP17.35■□□□□ 0.37
SALL4-201ENST00000217086 ATP1B4Q9UN42 357 aaPredicted RBP17.34■□□□□ 0.37
SALL4-201ENST00000217086 ZEB1P37275 1124 aaPredicted RBP17.34■□□□□ 0.37
SALL4-201ENST00000217086 CCER1Q8TC90 406 aaPredicted RBP17.33■□□□□ 0.36
SALL4-201ENST00000217086 ERICH6Q7L0X2 663 aa17.26■□□□□ 0.35
SALL4-201ENST00000217086 UBTFP17480 764 aaKnown RBP17.25■□□□□ 0.35
SALL4-201ENST00000217086 NEFLP07196 543 aa17.04■□□□□ 0.32
SALL4-201ENST00000217086 YTHDC1Q96MU7 727 aaKnown RBP16.94■□□□□ 0.3
SALL4-201ENST00000217086 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
SALL4-201ENST00000217086 TRIM26Q12899 539 aaPredicted RBP16.79■□□□□ 0.28
SALL4-201ENST00000217086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
SALL4-201ENST00000217086 HNRNPUL2Q1KMD3 747 aaKnown RBP16.73■□□□□ 0.27
SALL4-201ENST00000217086 ITGAEP38570 1179 aa16.72■□□□□ 0.27
SALL4-201ENST00000217086 MYT1LQ9UL68 1186 aa16.72■□□□□ 0.27
SALL4-201ENST00000217086 POLR3GLQ9BT43 218 aa16.65■□□□□ 0.26
SALL4-201ENST00000217086 MYT1Q01538 1121 aa16.62■□□□□ 0.25
SALL4-201ENST00000217086 HRCP23327 699 aa16.59■□□□□ 0.25
SALL4-201ENST00000217086 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.24
SALL4-201ENST00000217086 LOC105371045A0A1W2PR82 267 aa16.55■□□□□ 0.24
SALL4-201ENST00000217086 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
SALL4-201ENST00000217086 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
SALL4-201ENST00000217086 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
SALL4-201ENST00000217086 FAM50AQ14320 339 aaKnown RBP16.28■□□□□ 0.2
SALL4-201ENST00000217086 DIEXFQ68CQ4 756 aaKnown RBP16.24■□□□□ 0.19
SALL4-201ENST00000217086 CLSPNQ9HAW4 1339 aa16.23■□□□□ 0.19
SALL4-201ENST00000217086 TRIM52Q96A61 297 aa16.22■□□□□ 0.19
SALL4-201ENST00000217086 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
SALL4-201ENST00000217086 RTL5Q5HYW3 569 aaPredicted RBP16.15■□□□□ 0.18
SALL4-201ENST00000217086 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
SALL4-201ENST00000217086 NEUROD1Q13562 356 aa16.13■□□□□ 0.17
SALL4-201ENST00000217086 ABCC9O60706 1549 aa16.05■□□□□ 0.16
SALL4-201ENST00000217086 ZNF326Q5BKZ1 582 aaKnown RBP16.04■□□□□ 0.16
SALL4-201ENST00000217086 ANP32CO43423 234 aa16.01■□□□□ 0.15
SALL4-201ENST00000217086 FBLN2P98095 1184 aa15.99■□□□□ 0.15
SALL4-201ENST00000217086 BCANQ96GW7 911 aa15.95■□□□□ 0.14
SALL4-201ENST00000217086 ZBTB47Q9UFB7 747 aaPredicted RBP15.94■□□□□ 0.14
SALL4-201ENST00000217086 CDK11AQ9UQ88 783 aaPredicted RBP15.88■□□□□ 0.13
SALL4-201ENST00000217086 GTF3C3Q9Y5Q9 886 aa15.87■□□□□ 0.13
SALL4-201ENST00000217086 CANXP27824 592 aaKnown RBP15.83■□□□□ 0.13
SALL4-201ENST00000217086 P3H3Q8IVL6 736 aa15.83■□□□□ 0.12
SALL4-201ENST00000217086 NEFMP07197 916 aa15.83■□□□□ 0.12
SALL4-201ENST00000217086 SLC24A1O60721 1099 aa15.82■□□□□ 0.12
SALL4-201ENST00000217086 ARID3CA6NKF2 412 aa15.81■□□□□ 0.12
SALL4-201ENST00000217086 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
SALL4-201ENST00000217086 BCL11AQ9H165 835 aa15.76■□□□□ 0.11
SALL4-201ENST00000217086 ZNF777Q9ULD5 760 aaPredicted RBP15.75■□□□□ 0.11
SALL4-201ENST00000217086 ANP32AP39687 249 aaKnown RBP15.63■□□□□ 0.09
SALL4-201ENST00000217086 ESF1Q9H501 851 aaKnown RBP15.62■□□□□ 0.09
SALL4-201ENST00000217086 ACIN1Q9UKV3 1341 aaKnown RBP15.61■□□□□ 0.09
SALL4-201ENST00000217086 TONSLQ96HA7 1378 aa15.59■□□□□ 0.09
SALL4-201ENST00000217086 CHGAP10645 457 aaKnown RBP15.57■□□□□ 0.08
SALL4-201ENST00000217086 STAG3Q9UJ98 1225 aa15.55■□□□□ 0.08
SALL4-201ENST00000217086 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
SALL4-201ENST00000217086 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
SALL4-201ENST00000217086 HNRNPUQ00839 825 aaKnown RBP eCLIP15.49■□□□□ 0.07
SALL4-201ENST00000217086 FKBP8Q14318 412 aa15.48■□□□□ 0.07
SALL4-201ENST00000217086 DDX10Q13206 875 aaKnown RBP15.47■□□□□ 0.07
SALL4-201ENST00000217086 FAM9BQ8IZU0 186 aa15.46■□□□□ 0.07
SALL4-201ENST00000217086 HSP90AA1P07900 732 aaKnown RBP15.46■□□□□ 0.07
SALL4-201ENST00000217086 UPF2Q9HAU5 1272 aaKnown RBP15.44■□□□□ 0.06
SALL4-201ENST00000217086 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
SALL4-201ENST00000217086 CHIC2Q9UKJ5 165 aa15.43■□□□□ 0.06
SALL4-201ENST00000217086 ANP32BQ92688 251 aaKnown RBP15.42■□□□□ 0.06
SALL4-201ENST00000217086 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
SALL4-201ENST00000217086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.06
SALL4-201ENST00000217086 SALL2Q9Y467 1007 aaPredicted RBP15.41■□□□□ 0.06
SALL4-201ENST00000217086 TMC1Q8TDI8 760 aa15.4■□□□□ 0.06
SALL4-201ENST00000217086 TSPY4P0CV99 314 aa15.38■□□□□ 0.05
SALL4-201ENST00000217086 TSPY10P0CW01 314 aa15.38■□□□□ 0.05
SALL4-201ENST00000217086 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.35■□□□□ 0.05
SALL4-201ENST00000217086 WDR43Q15061 677 aaKnown RBP eCLIP15.34■□□□□ 0.05
SALL4-201ENST00000217086 CCDC136Q96JN2 1154 aa15.34■□□□□ 0.05
SALL4-201ENST00000217086 KDM2AQ9Y2K7 1162 aa15.32■□□□□ 0.04
SALL4-201ENST00000217086 DCAF1Q9Y4B6 1507 aa15.32■□□□□ 0.04
SALL4-201ENST00000217086 MTUS2Q5JR59 1369 aa15.32■□□□□ 0.04
SALL4-201ENST00000217086 MRS2Q9HD23 443 aa15.31■□□□□ 0.04
SALL4-201ENST00000217086 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
SALL4-201ENST00000217086 EIF5BO60841 1220 aaKnown RBP15.24■□□□□ 0.03
SALL4-201ENST00000217086 ZCCHC6Q5VYS8 1495 aaKnown RBP15.22■□□□□ 0.03
SALL4-201ENST00000217086 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.03
SALL4-201ENST00000217086 CLIP1P30622 1438 aa15.2■□□□□ 0.02
SALL4-201ENST00000217086 MYH16Q9H6N6 1097 aa15.18■□□□□ 0.02
SALL4-201ENST00000217086 SCAF1Q9H7N4 1312 aaKnown RBP15.18■□□□□ 0.02
SALL4-201ENST00000217086 HIRIP3Q9BW71 556 aaPredicted RBP15.18■□□□□ 0.02
SALL4-201ENST00000217086 RRP7BPQ9NSQ0 103 aa15.18■□□□□ 0.02
SALL4-201ENST00000217086 MIER1Q8N108 512 aa15.15■□□□□ 0.02
SALL4-201ENST00000217086 NBR1Q14596 966 aa15.15■□□□□ 0.02
SALL4-201ENST00000217086 IRX6P78412 446 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms