RNA–Protein interactions for RNA: ENST00000374866.7

COL5A2-201, Transcript of collagen type V alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A2, Length 6,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-201ENST00000374866 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.75
COL5A2-201ENST00000374866 EHMT2Q96KQ7 1210 aa18.8■□□□□ 0.6
COL5A2-201ENST00000374866 SUPT5HO00267 1087 aaKnown RBP18.4■□□□□ 0.54
COL5A2-201ENST00000374866 TTBK1Q5TCY1 1321 aaPredicted RBP18.09■□□□□ 0.49
COL5A2-201ENST00000374866 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
COL5A2-201ENST00000374866 PELP1Q8IZL8 1130 aaKnown RBP17.85■□□□□ 0.45
COL5A2-201ENST00000374866 RANGAP1P46060 587 aaPredicted RBP17.78■□□□□ 0.44
COL5A2-201ENST00000374866 APLP2Q06481 763 aa17.66■□□□□ 0.42
COL5A2-201ENST00000374866 FAM9AQ8IZU1 332 aaPredicted RBP17.65■□□□□ 0.42
COL5A2-201ENST00000374866 ERICH6Q7L0X2 663 aa17.62■□□□□ 0.41
COL5A2-201ENST00000374866 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
COL5A2-201ENST00000374866 NISCHQ9Y2I1 1504 aa17.54■□□□□ 0.4
COL5A2-201ENST00000374866 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
COL5A2-201ENST00000374866 MYT1Q01538 1121 aa17.35■□□□□ 0.37
COL5A2-201ENST00000374866 YTHDC1Q96MU7 727 aaKnown RBP17.26■□□□□ 0.35
COL5A2-201ENST00000374866 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
COL5A2-201ENST00000374866 CCER1Q8TC90 406 aaPredicted RBP17.12■□□□□ 0.33
COL5A2-201ENST00000374866 CNGB1Q14028 1251 aaPredicted RBP17.08■□□□□ 0.33
COL5A2-201ENST00000374866 PPARGC1BQ86YN6 1023 aaKnown RBP17.05■□□□□ 0.32
COL5A2-201ENST00000374866 POLR3GLQ9BT43 218 aa17.01■□□□□ 0.31
COL5A2-201ENST00000374866 MYT1LQ9UL68 1186 aa17■□□□□ 0.31
COL5A2-201ENST00000374866 CENPBP07199 599 aaPredicted RBP16.95■□□□□ 0.3
COL5A2-201ENST00000374866 NEFLP07196 543 aa16.9■□□□□ 0.3
COL5A2-201ENST00000374866 UBTFP17480 764 aaKnown RBP16.85■□□□□ 0.29
COL5A2-201ENST00000374866 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
COL5A2-201ENST00000374866 ITGAEP38570 1179 aa16.77■□□□□ 0.28
COL5A2-201ENST00000374866 DAXXQ9UER7 740 aaPredicted RBP16.74■□□□□ 0.27
COL5A2-201ENST00000374866 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
COL5A2-201ENST00000374866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
COL5A2-201ENST00000374866 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
COL5A2-201ENST00000374866 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
COL5A2-201ENST00000374866 ZEB1P37275 1124 aaPredicted RBP16.46■□□□□ 0.23
COL5A2-201ENST00000374866 CLSPNQ9HAW4 1339 aa16.41■□□□□ 0.22
COL5A2-201ENST00000374866 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
COL5A2-201ENST00000374866 ZNF316A6NFI3 1004 aaPredicted RBP16.36■□□□□ 0.21
COL5A2-201ENST00000374866 BCANQ96GW7 911 aa16.18■□□□□ 0.18
COL5A2-201ENST00000374866 RTL5Q5HYW3 569 aaPredicted RBP16.13■□□□□ 0.17
COL5A2-201ENST00000374866 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
COL5A2-201ENST00000374866 ZNF326Q5BKZ1 582 aaKnown RBP16.09■□□□□ 0.17
COL5A2-201ENST00000374866 LOC105371045A0A1W2PR82 267 aa16.07■□□□□ 0.16
COL5A2-201ENST00000374866 NEUROD1Q13562 356 aa16.06■□□□□ 0.16
COL5A2-201ENST00000374866 FAM50AQ14320 339 aaKnown RBP16.05■□□□□ 0.16
COL5A2-201ENST00000374866 TRIM52Q96A61 297 aa16.05■□□□□ 0.16
COL5A2-201ENST00000374866 HRCP23327 699 aa16.02■□□□□ 0.16
COL5A2-201ENST00000374866 ABCC9O60706 1549 aa16■□□□□ 0.15
COL5A2-201ENST00000374866 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
COL5A2-201ENST00000374866 ZBTB47Q9UFB7 747 aaPredicted RBP15.96■□□□□ 0.15
COL5A2-201ENST00000374866 ARID3CA6NKF2 412 aa15.91■□□□□ 0.14
COL5A2-201ENST00000374866 CANXP27824 592 aaKnown RBP15.9■□□□□ 0.14
COL5A2-201ENST00000374866 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL5A2-201ENST00000374866 FBLN2P98095 1184 aa15.88■□□□□ 0.13
COL5A2-201ENST00000374866 NPM2Q86SE8 214 aaKnown RBP15.81■□□□□ 0.12
COL5A2-201ENST00000374866 DIEXFQ68CQ4 756 aaKnown RBP15.8■□□□□ 0.12
COL5A2-201ENST00000374866 PLEKHG5O94827 1062 aa15.75■□□□□ 0.11
COL5A2-201ENST00000374866 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
COL5A2-201ENST00000374866 A0A0G2JS52 829 aa15.7■□□□□ 0.1
COL5A2-201ENST00000374866 ARXQ96QS3 562 aa15.68■□□□□ 0.1
COL5A2-201ENST00000374866 CDK11AQ9UQ88 783 aaPredicted RBP15.66■□□□□ 0.1
COL5A2-201ENST00000374866 SCAF1Q9H7N4 1312 aaKnown RBP15.66■□□□□ 0.1
COL5A2-201ENST00000374866 EIF5BO60841 1220 aaKnown RBP15.63■□□□□ 0.09
COL5A2-201ENST00000374866 P3H3Q8IVL6 736 aa15.63■□□□□ 0.09
COL5A2-201ENST00000374866 ANP32CO43423 234 aa15.62■□□□□ 0.09
COL5A2-201ENST00000374866 GTF3C3Q9Y5Q9 886 aa15.62■□□□□ 0.09
COL5A2-201ENST00000374866 NEFMP07197 916 aa15.61■□□□□ 0.09
COL5A2-201ENST00000374866 SALL2Q9Y467 1007 aaPredicted RBP15.6■□□□□ 0.09
COL5A2-201ENST00000374866 ZNF777Q9ULD5 760 aaPredicted RBP15.59■□□□□ 0.09
COL5A2-201ENST00000374866 CHGAP10645 457 aaKnown RBP15.59■□□□□ 0.09
COL5A2-201ENST00000374866 TULP1O00294 542 aaPredicted RBP15.54■□□□□ 0.08
COL5A2-201ENST00000374866 ZBTB7CA1YPR0 619 aa15.53■□□□□ 0.08
COL5A2-201ENST00000374866 HSP90AA1P07900 732 aaKnown RBP15.52■□□□□ 0.08
COL5A2-201ENST00000374866 STAG3Q9UJ98 1225 aa15.5■□□□□ 0.07
COL5A2-201ENST00000374866 ESF1Q9H501 851 aaKnown RBP15.46■□□□□ 0.07
COL5A2-201ENST00000374866 ANP32AP39687 249 aaKnown RBP15.43■□□□□ 0.06
COL5A2-201ENST00000374866 TPRNQ4KMQ1 711 aa15.41■□□□□ 0.06
COL5A2-201ENST00000374866 NBR1Q14596 966 aa15.4■□□□□ 0.06
COL5A2-201ENST00000374866 ANP32BQ92688 251 aaKnown RBP15.37■□□□□ 0.05
COL5A2-201ENST00000374866 TAOK2Q9UL54 1235 aa15.35■□□□□ 0.05
COL5A2-201ENST00000374866 FAM9BQ8IZU0 186 aa15.33■□□□□ 0.04
COL5A2-201ENST00000374866 SENP3-EIF4A1A0A087X0R7 540 aa15.32■□□□□ 0.04
COL5A2-201ENST00000374866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.32■□□□□ 0.04
COL5A2-201ENST00000374866 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
COL5A2-201ENST00000374866 C14orf37Q86TY3 774 aa15.31■□□□□ 0.04
COL5A2-201ENST00000374866 FKBP8Q14318 412 aa15.29■□□□□ 0.04
COL5A2-201ENST00000374866 CDK11BP21127 795 aaKnown RBP15.26■□□□□ 0.03
COL5A2-201ENST00000374866 IRX6P78412 446 aaPredicted RBP15.25■□□□□ 0.03
COL5A2-201ENST00000374866 UPF2Q9HAU5 1272 aaKnown RBP15.2■□□□□ 0.02
COL5A2-201ENST00000374866 KDM2AQ9Y2K7 1162 aa15.2■□□□□ 0.02
COL5A2-201ENST00000374866 HNRNPUQ00839 825 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL5A2-201ENST00000374866 CHIC2Q9UKJ5 165 aa15.15■□□□□ 0.02
COL5A2-201ENST00000374866 HIRIP3Q9BW71 556 aaPredicted RBP15.14■□□□□ 0.01
COL5A2-201ENST00000374866 DDX10Q13206 875 aaKnown RBP15.12■□□□□ 0.01
COL5A2-201ENST00000374866 HAP1P54257 671 aaPredicted RBP15.1■□□□□ 0.01
COL5A2-201ENST00000374866 SCRIBQ14160 1630 aa15.08■□□□□ 0.01
COL5A2-201ENST00000374866 WDR43Q15061 677 aaKnown RBP eCLIP15.06■□□□□ 0
COL5A2-201ENST00000374866 NCLP19338 710 aaKnown RBP15.06■□□□□ 0
COL5A2-201ENST00000374866 AMER1Q5JTC6 1135 aaPredicted RBP15.04■□□□□ -0
COL5A2-201ENST00000374866 CCDC136Q96JN2 1154 aa15.04■□□□□ -0
COL5A2-201ENST00000374866 NPM1P06748 294 aaKnown RBP eCLIP15.03■□□□□ -0
COL5A2-201ENST00000374866 TMC1Q8TDI8 760 aa15.03■□□□□ -0
COL5A2-201ENST00000374866 PPM1GO15355 546 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms