RNA–Protein interactions for RNA: ENST00000329082.11

RGMA-201, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RGMA, Length 11,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-201ENST00000329082 PELP1Q8IZL8 1130 aaKnown RBP17.29■□□□□ 0.36
RGMA-201ENST00000329082 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
RGMA-201ENST00000329082 MYT1Q01538 1121 aa16.57■□□□□ 0.24
RGMA-201ENST00000329082 SUPT5HO00267 1087 aaKnown RBP16.56■□□□□ 0.24
RGMA-201ENST00000329082 ERICH6Q7L0X2 663 aa16.5■□□□□ 0.23
RGMA-201ENST00000329082 CCER1Q8TC90 406 aaPredicted RBP16.43■□□□□ 0.22
RGMA-201ENST00000329082 CENPBP07199 599 aaPredicted RBP16.34■□□□□ 0.21
RGMA-201ENST00000329082 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
RGMA-201ENST00000329082 APLP2Q06481 763 aa16.22■□□□□ 0.19
RGMA-201ENST00000329082 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
RGMA-201ENST00000329082 SHROOM4Q9ULL8 1493 aa16.06■□□□□ 0.16
RGMA-201ENST00000329082 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
RGMA-201ENST00000329082 NEFLP07196 543 aa16■□□□□ 0.15
RGMA-201ENST00000329082 TTBK1Q5TCY1 1321 aaPredicted RBP15.82■□□□□ 0.12
RGMA-201ENST00000329082 FAM9AQ8IZU1 332 aaPredicted RBP15.79■□□□□ 0.12
RGMA-201ENST00000329082 YTHDC1Q96MU7 727 aaKnown RBP15.76■□□□□ 0.11
RGMA-201ENST00000329082 NISCHQ9Y2I1 1504 aa15.7■□□□□ 0.1
RGMA-201ENST00000329082 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
RGMA-201ENST00000329082 RANGAP1P46060 587 aaPredicted RBP15.42■□□□□ 0.06
RGMA-201ENST00000329082 RTL5Q5HYW3 569 aaPredicted RBP15.42■□□□□ 0.06
RGMA-201ENST00000329082 ATP1B4Q9UN42 357 aaPredicted RBP15.36■□□□□ 0.05
RGMA-201ENST00000329082 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
RGMA-201ENST00000329082 UBTFP17480 764 aaKnown RBP15.3■□□□□ 0.04
RGMA-201ENST00000329082 ZNF316A6NFI3 1004 aaPredicted RBP15.3■□□□□ 0.04
RGMA-201ENST00000329082 HRCP23327 699 aa15.26■□□□□ 0.03
RGMA-201ENST00000329082 TRIM26Q12899 539 aaPredicted RBP15.23■□□□□ 0.03
RGMA-201ENST00000329082 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
RGMA-201ENST00000329082 POLR3GLQ9BT43 218 aa15.07■□□□□ 0
RGMA-201ENST00000329082 PPARGC1BQ86YN6 1023 aaKnown RBP15.06■□□□□ 0
RGMA-201ENST00000329082 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
RGMA-201ENST00000329082 ITGAEP38570 1179 aa14.89□□□□□ -0.03
RGMA-201ENST00000329082 CNGB1Q14028 1251 aaPredicted RBP14.89□□□□□ -0.03
RGMA-201ENST00000329082 CDK11AQ9UQ88 783 aaPredicted RBP14.87□□□□□ -0.03
RGMA-201ENST00000329082 GTF3C3Q9Y5Q9 886 aa14.82□□□□□ -0.04
RGMA-201ENST00000329082 GLIPR1L2Q4G1C9 344 aa14.81□□□□□ -0.04
RGMA-201ENST00000329082 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
RGMA-201ENST00000329082 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
RGMA-201ENST00000329082 EIF5BO60841 1220 aaKnown RBP14.77□□□□□ -0.04
RGMA-201ENST00000329082 BCANQ96GW7 911 aa14.77□□□□□ -0.04
RGMA-201ENST00000329082 MYT1LQ9UL68 1186 aa14.75□□□□□ -0.05
RGMA-201ENST00000329082 ANP32AP39687 249 aaKnown RBP14.72□□□□□ -0.05
RGMA-201ENST00000329082 ZBTB47Q9UFB7 747 aaPredicted RBP14.72□□□□□ -0.05
RGMA-201ENST00000329082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
RGMA-201ENST00000329082 ANP32BQ92688 251 aaKnown RBP14.66□□□□□ -0.06
RGMA-201ENST00000329082 ANP32CO43423 234 aa14.64□□□□□ -0.07
RGMA-201ENST00000329082 LOC105371045A0A1W2PR82 267 aa14.62□□□□□ -0.07
RGMA-201ENST00000329082 CANXP27824 592 aaKnown RBP14.57□□□□□ -0.08
RGMA-201ENST00000329082 CHIC1Q5VXU3 224 aa14.55□□□□□ -0.08
RGMA-201ENST00000329082 ACIN1Q9UKV3 1341 aaKnown RBP14.53□□□□□ -0.08
RGMA-201ENST00000329082 NPM2Q86SE8 214 aaKnown RBP14.48□□□□□ -0.09
RGMA-201ENST00000329082 HSP90AA1P07900 732 aaKnown RBP14.47□□□□□ -0.09
RGMA-201ENST00000329082 FAM50AQ14320 339 aaKnown RBP14.46□□□□□ -0.09
RGMA-201ENST00000329082 NEUROD1Q13562 356 aa14.46□□□□□ -0.1
RGMA-201ENST00000329082 BCL11AQ9H165 835 aa14.45□□□□□ -0.1
RGMA-201ENST00000329082 TRIM52Q96A61 297 aa14.4□□□□□ -0.1
RGMA-201ENST00000329082 UPF2Q9HAU5 1272 aaKnown RBP14.39□□□□□ -0.11
RGMA-201ENST00000329082 NEFMP07197 916 aa14.36□□□□□ -0.11
RGMA-201ENST00000329082 ZNF326Q5BKZ1 582 aaKnown RBP14.35□□□□□ -0.11
RGMA-201ENST00000329082 NBR1Q14596 966 aa14.34□□□□□ -0.11
RGMA-201ENST00000329082 SLC24A1O60721 1099 aa14.33□□□□□ -0.12
RGMA-201ENST00000329082 FKBP8Q14318 412 aa14.28□□□□□ -0.12
RGMA-201ENST00000329082 TNNT2P45379 298 aaPredicted RBP14.27□□□□□ -0.13
RGMA-201ENST00000329082 ARXQ96QS3 562 aa14.23□□□□□ -0.13
RGMA-201ENST00000329082 CCDC136Q96JN2 1154 aa14.16□□□□□ -0.14
RGMA-201ENST00000329082 HNRNPUQ00839 825 aaKnown RBP eCLIP14.13□□□□□ -0.15
RGMA-201ENST00000329082 TRIM44Q96DX7 344 aaPredicted RBP14.13□□□□□ -0.15
RGMA-201ENST00000329082 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.12□□□□□ -0.15
RGMA-201ENST00000329082 ANP32EQ9BTT0 268 aa14.1□□□□□ -0.15
RGMA-201ENST00000329082 CDK11BP21127 795 aaKnown RBP14.08□□□□□ -0.16
RGMA-201ENST00000329082 BECN1Q14457 450 aa14.05□□□□□ -0.16
RGMA-201ENST00000329082 DDRGK1Q96HY6 314 aa14.04□□□□□ -0.16
RGMA-201ENST00000329082 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.16
RGMA-201ENST00000329082 TONSLQ96HA7 1378 aa14.02□□□□□ -0.16
RGMA-201ENST00000329082 FAM9BQ8IZU0 186 aa14.01□□□□□ -0.17
RGMA-201ENST00000329082 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
RGMA-201ENST00000329082 GOLGA6L22H0YM25 854 aa13.99□□□□□ -0.17
RGMA-201ENST00000329082 NCLP19338 710 aaKnown RBP13.96□□□□□ -0.17
RGMA-201ENST00000329082 NAP1L5Q96NT1 182 aaPredicted RBP13.96□□□□□ -0.18
RGMA-201ENST00000329082 PTMAP06454 111 aaKnown RBP13.95□□□□□ -0.18
RGMA-201ENST00000329082 MYH16Q9H6N6 1097 aa13.95□□□□□ -0.18
RGMA-201ENST00000329082 TMC1Q8TDI8 760 aa13.95□□□□□ -0.18
RGMA-201ENST00000329082 DNTTIP2Q5QJE6 756 aaKnown RBP13.94□□□□□ -0.18
RGMA-201ENST00000329082 DDX10Q13206 875 aaKnown RBP13.94□□□□□ -0.18
RGMA-201ENST00000329082 DCAF1Q9Y4B6 1507 aa13.91□□□□□ -0.18
RGMA-201ENST00000329082 SALL2Q9Y467 1007 aaPredicted RBP13.91□□□□□ -0.18
RGMA-201ENST00000329082 WDR43Q15061 677 aaKnown RBP eCLIP13.87□□□□□ -0.19
RGMA-201ENST00000329082 ZRSR1Q15695 479 aaKnown RBP13.87□□□□□ -0.19
RGMA-201ENST00000329082 IRX6P78412 446 aaPredicted RBP13.86□□□□□ -0.19
RGMA-201ENST00000329082 MRS2Q9HD23 443 aa13.86□□□□□ -0.19
RGMA-201ENST00000329082 PPM1GO15355 546 aaPredicted RBP13.85□□□□□ -0.19
RGMA-201ENST00000329082 RTN4Q9NQC3 1192 aaKnown RBP13.84□□□□□ -0.19
RGMA-201ENST00000329082 CHAF1AQ13111 956 aaPredicted RBP13.77□□□□□ -0.2
RGMA-201ENST00000329082 CCDC180Q9P1Z9 1646 aa13.77□□□□□ -0.2
RGMA-201ENST00000329082 MIER1Q8N108 512 aa13.77□□□□□ -0.21
RGMA-201ENST00000329082 NOP58Q9Y2X3 529 aaKnown RBP13.76□□□□□ -0.21
RGMA-201ENST00000329082 CASC1Q6TDU7 716 aa13.76□□□□□ -0.21
RGMA-201ENST00000329082 GOLGA6L6A8MZA4 724 aa13.75□□□□□ -0.21
RGMA-201ENST00000329082 ZNF777Q9ULD5 760 aaPredicted RBP13.75□□□□□ -0.21
RGMA-201ENST00000329082 NRDCO43847 1150 aa13.74□□□□□ -0.21
RGMA-201ENST00000329082 LAS1LQ9Y4W2 734 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms