RNA–Protein interactions for RNA: ENST00000254898.6

MATN2-201, Transcript of matrilin 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MATN2, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN2-201ENST00000254898 NISCHQ9Y2I1 1504 aa20.7■□□□□ 0.9
MATN2-201ENST00000254898 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
MATN2-201ENST00000254898 SHROOM4Q9ULL8 1493 aa19.5■□□□□ 0.71
MATN2-201ENST00000254898 SUPT5HO00267 1087 aaKnown RBP19.49■□□□□ 0.71
MATN2-201ENST00000254898 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
MATN2-201ENST00000254898 FAM9AQ8IZU1 332 aaPredicted RBP18.33■□□□□ 0.53
MATN2-201ENST00000254898 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
MATN2-201ENST00000254898 PCGF6Q9BYE7 350 aa17.94■□□□□ 0.46
MATN2-201ENST00000254898 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
MATN2-201ENST00000254898 RANGAP1P46060 587 aaPredicted RBP17.9■□□□□ 0.46
MATN2-201ENST00000254898 ABCC9O60706 1549 aa17.85■□□□□ 0.45
MATN2-201ENST00000254898 HRCP23327 699 aa17.8■□□□□ 0.44
MATN2-201ENST00000254898 PPARGC1BQ86YN6 1023 aaKnown RBP17.71■□□□□ 0.43
MATN2-201ENST00000254898 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
MATN2-201ENST00000254898 APLP2Q06481 763 aa17.66■□□□□ 0.42
MATN2-201ENST00000254898 CHIC1Q5VXU3 224 aa17.59■□□□□ 0.41
MATN2-201ENST00000254898 LOC105371045A0A1W2PR82 267 aa17.59■□□□□ 0.41
MATN2-201ENST00000254898 UBTFP17480 764 aaKnown RBP17.59■□□□□ 0.41
MATN2-201ENST00000254898 ATP1B4Q9UN42 357 aaPredicted RBP17.47■□□□□ 0.39
MATN2-201ENST00000254898 CCER1Q8TC90 406 aaPredicted RBP17.22■□□□□ 0.35
MATN2-201ENST00000254898 PELP1Q8IZL8 1130 aaKnown RBP17.19■□□□□ 0.34
MATN2-201ENST00000254898 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
MATN2-201ENST00000254898 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
MATN2-201ENST00000254898 MYO15BQ96JP2 1530 aa17.07■□□□□ 0.32
MATN2-201ENST00000254898 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
MATN2-201ENST00000254898 ITGAEP38570 1179 aa17.03■□□□□ 0.32
MATN2-201ENST00000254898 ZEB1P37275 1124 aaPredicted RBP16.96■□□□□ 0.31
MATN2-201ENST00000254898 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
MATN2-201ENST00000254898 CCDC180Q9P1Z9 1646 aa16.9■□□□□ 0.3
MATN2-201ENST00000254898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
MATN2-201ENST00000254898 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
MATN2-201ENST00000254898 CENPBP07199 599 aaPredicted RBP16.71■□□□□ 0.26
MATN2-201ENST00000254898 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
MATN2-201ENST00000254898 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
MATN2-201ENST00000254898 P3H3Q8IVL6 736 aa16.65■□□□□ 0.26
MATN2-201ENST00000254898 FBLN2P98095 1184 aa16.65■□□□□ 0.26
MATN2-201ENST00000254898 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
MATN2-201ENST00000254898 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
MATN2-201ENST00000254898 RSF1Q96T23 1441 aaPredicted RBP16.59■□□□□ 0.25
MATN2-201ENST00000254898 ARID3CA6NKF2 412 aa16.57■□□□□ 0.24
MATN2-201ENST00000254898 MYT1LQ9UL68 1186 aa16.57■□□□□ 0.24
MATN2-201ENST00000254898 FAM50AQ14320 339 aaKnown RBP16.56■□□□□ 0.24
MATN2-201ENST00000254898 ACIN1Q9UKV3 1341 aaKnown RBP16.53■□□□□ 0.24
MATN2-201ENST00000254898 MYT1Q01538 1121 aa16.51■□□□□ 0.23
MATN2-201ENST00000254898 NEUROD1Q13562 356 aa16.51■□□□□ 0.23
MATN2-201ENST00000254898 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
MATN2-201ENST00000254898 DIEXFQ68CQ4 756 aaKnown RBP16.49■□□□□ 0.23
MATN2-201ENST00000254898 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
MATN2-201ENST00000254898 CNGB1Q14028 1251 aaPredicted RBP16.48■□□□□ 0.23
MATN2-201ENST00000254898 POLR3GLQ9BT43 218 aa16.45■□□□□ 0.22
MATN2-201ENST00000254898 NACADO15069 1562 aa16.41■□□□□ 0.22
MATN2-201ENST00000254898 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
MATN2-201ENST00000254898 ZNF777Q9ULD5 760 aaPredicted RBP16.19■□□□□ 0.18
MATN2-201ENST00000254898 BAZ1BQ9UIG0 1483 aaKnown RBP16.18■□□□□ 0.18
MATN2-201ENST00000254898 MROH2BQ7Z745 1585 aa16.18■□□□□ 0.18
MATN2-201ENST00000254898 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
MATN2-201ENST00000254898 WRNQ14191 1432 aaPredicted RBP eCLIP16.13■□□□□ 0.17
MATN2-201ENST00000254898 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
MATN2-201ENST00000254898 NEFLP07196 543 aa16.08■□□□□ 0.16
MATN2-201ENST00000254898 ZNF316A6NFI3 1004 aaPredicted RBP16.07■□□□□ 0.16
MATN2-201ENST00000254898 CHIC2Q9UKJ5 165 aa16.04■□□□□ 0.16
MATN2-201ENST00000254898 CLIP1P30622 1438 aa16.03■□□□□ 0.16
MATN2-201ENST00000254898 CHMP7Q8WUX9 453 aaPredicted RBP16.02■□□□□ 0.15
MATN2-201ENST00000254898 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
MATN2-201ENST00000254898 SOGA1O94964 1423 aa16.01■□□□□ 0.15
MATN2-201ENST00000254898 CEP162Q5TB80 1403 aa15.98■□□□□ 0.15
MATN2-201ENST00000254898 CCDC88BA6NC98 1476 aa15.98■□□□□ 0.15
MATN2-201ENST00000254898 MIER1Q8N108 512 aa15.96■□□□□ 0.15
MATN2-201ENST00000254898 CDK11AQ9UQ88 783 aaPredicted RBP15.96■□□□□ 0.15
MATN2-201ENST00000254898 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
MATN2-201ENST00000254898 WIZO95785 1651 aa15.91■□□□□ 0.14
MATN2-201ENST00000254898 GOLGA3Q08378 1498 aa15.88■□□□□ 0.13
MATN2-201ENST00000254898 KIF27Q86VH2 1401 aa15.87■□□□□ 0.13
MATN2-201ENST00000254898 MTUS2Q5JR59 1369 aa15.87■□□□□ 0.13
MATN2-201ENST00000254898 BCANQ96GW7 911 aa15.87■□□□□ 0.13
MATN2-201ENST00000254898 EEA1Q15075 1411 aa15.85■□□□□ 0.13
MATN2-201ENST00000254898 TNIKQ9UKE5 1360 aa15.84■□□□□ 0.13
MATN2-201ENST00000254898 HIRIP3Q9BW71 556 aaPredicted RBP15.83■□□□□ 0.12
MATN2-201ENST00000254898 RRP7BPQ9NSQ0 103 aa15.82■□□□□ 0.12
MATN2-201ENST00000254898 KCNH8Q96L42 1107 aa15.81■□□□□ 0.12
MATN2-201ENST00000254898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.12
MATN2-201ENST00000254898 CUX2O14529 1486 aa15.78■□□□□ 0.12
MATN2-201ENST00000254898 ANP32CO43423 234 aa15.77■□□□□ 0.12
MATN2-201ENST00000254898 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.11
MATN2-201ENST00000254898 ERICH6Q7L0X2 663 aa15.76■□□□□ 0.11
MATN2-201ENST00000254898 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
MATN2-201ENST00000254898 DDX10Q13206 875 aaKnown RBP15.75■□□□□ 0.11
MATN2-201ENST00000254898 NPM1P06748 294 aaKnown RBP eCLIP15.75■□□□□ 0.11
MATN2-201ENST00000254898 CARMIL1Q5VZK9 1371 aa15.74■□□□□ 0.11
MATN2-201ENST00000254898 PLPPR3Q6T4P5 718 aa15.73■□□□□ 0.11
MATN2-201ENST00000254898 ATAD2BQ9ULI0 1458 aa15.73■□□□□ 0.11
MATN2-201ENST00000254898 TONSLQ96HA7 1378 aa15.73■□□□□ 0.11
MATN2-201ENST00000254898 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
MATN2-201ENST00000254898 CHGAP10645 457 aaKnown RBP15.72■□□□□ 0.11
MATN2-201ENST00000254898 TSPY4P0CV99 314 aa15.71■□□□□ 0.11
MATN2-201ENST00000254898 TSPY10P0CW01 314 aa15.71■□□□□ 0.11
MATN2-201ENST00000254898 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
MATN2-201ENST00000254898 KDM2AQ9Y2K7 1162 aa15.69■□□□□ 0.1
MATN2-201ENST00000254898 SMARCA2P51531 1590 aa15.68■□□□□ 0.1
MATN2-201ENST00000254898 KANK4Q5T7N3 995 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms