Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HINT1-205ENST00000508488 703 ntTSL 2 BASIC18.09■□□□□ 0.49
COL15A1P39059 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.09■□□□□ 0.49
COL15A1P39059 MAX-218ENST00000557746 571 ntTSL 4 BASIC18.09■□□□□ 0.49
COL15A1P39059 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC18.09■□□□□ 0.49
COL15A1P39059 THY1-209ENST00000580275 578 ntTSL 3 BASIC18.09■□□□□ 0.49
COL15A1P39059 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC18.09■□□□□ 0.49
COL15A1P39059 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL15A1P39059 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.09■□□□□ 0.49
COL15A1P39059 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC18.09■□□□□ 0.49
COL15A1P39059 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL15A1P39059 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC18.09■□□□□ 0.49
COL15A1P39059 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC18.09■□□□□ 0.49
COL15A1P39059 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL15A1P39059 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL15A1P39059 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL15A1P39059 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
COL15A1P39059 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL15A1P39059 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL15A1P39059 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL15A1P39059 BX679664.3-201ENST00000414070 555 ntBASIC18.08■□□□□ 0.49
COL15A1P39059 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC18.08■□□□□ 0.49
COL15A1P39059 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC18.08■□□□□ 0.49
COL15A1P39059 RN7SL788P-201ENST00000460504 316 ntBASIC18.08■□□□□ 0.49
COL15A1P39059 RN7SL494P-201ENST00000461517 304 ntBASIC18.08■□□□□ 0.49
COL15A1P39059 AC113935.1-201ENST00000471722 555 ntBASIC18.08■□□□□ 0.49
COL15A1P39059 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.08■□□□□ 0.49
COL15A1P39059 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.08■□□□□ 0.49
COL15A1P39059 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC18.08■□□□□ 0.49
COL15A1P39059 AC005740.1-201ENST00000515639 522 ntBASIC18.08■□□□□ 0.49
COL15A1P39059 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
COL15A1P39059 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
COL15A1P39059 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.08■□□□□ 0.49
COL15A1P39059 AC145285.5-201ENST00000562217 361 ntBASIC18.08■□□□□ 0.49
COL15A1P39059 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
COL15A1P39059 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC18.08■□□□□ 0.49
COL15A1P39059 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL15A1P39059 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COL15A1P39059 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL15A1P39059 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL15A1P39059 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL15A1P39059 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL15A1P39059 AC019109.1-201ENST00000401725 1874 ntBASIC18.08■□□□□ 0.48
COL15A1P39059 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL15A1P39059 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COL15A1P39059 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL15A1P39059 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL15A1P39059 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL15A1P39059 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COL15A1P39059 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL15A1P39059 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL15A1P39059 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC18.07■□□□□ 0.48
COL15A1P39059 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.07■□□□□ 0.48
COL15A1P39059 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL15A1P39059 AP001267.2-201ENST00000532619 2086 ntBASIC18.07■□□□□ 0.48
COL15A1P39059 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COL15A1P39059 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COL15A1P39059 LINC00265-2P-201ENST00000413372 782 ntBASIC18.07■□□□□ 0.48
COL15A1P39059 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.07■□□□□ 0.48
COL15A1P39059 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC18.07■□□□□ 0.48
COL15A1P39059 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.07■□□□□ 0.48
COL15A1P39059 TRMT112P3-201ENST00000580149 358 ntBASIC18.07■□□□□ 0.48
COL15A1P39059 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.07■□□□□ 0.48
COL15A1P39059 GAS7-216ENST00000583882 553 ntTSL 5 BASIC18.07■□□□□ 0.48
COL15A1P39059 AC140479.7-201ENST00000636301 2332 ntBASIC18.07■□□□□ 0.48
COL15A1P39059 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL15A1P39059 LINC00552-201ENST00000625151 2579 ntBASIC18.07■□□□□ 0.48
COL15A1P39059 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC18.07■□□□□ 0.48
COL15A1P39059 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.07■□□□□ 0.48
COL15A1P39059 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COL15A1P39059 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL15A1P39059 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL15A1P39059 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC18.07■□□□□ 0.48
COL15A1P39059 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL15A1P39059 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.07■□□□□ 0.48
COL15A1P39059 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL15A1P39059 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
COL15A1P39059 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL15A1P39059 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL15A1P39059 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
COL15A1P39059 RN7SL832P-201ENST00000607781 1756 ntBASIC18.06■□□□□ 0.48
COL15A1P39059 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC18.06■□□□□ 0.48
COL15A1P39059 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
COL15A1P39059 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.06■□□□□ 0.48
COL15A1P39059 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms