Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM23P36406 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 AC011498.7-201ENST00000624986 2027 ntBASIC14.24□□□□□ -0.13
TRIM23P36406 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TRIM23P36406 PCDHA3-202ENST00000532566 4594 ntBASIC14.24□□□□□ -0.13
TRIM23P36406 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM23P36406 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM23P36406 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM23P36406 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM23P36406 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TRIM23P36406 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
TRIM23P36406 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM23P36406 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM23P36406 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
TRIM23P36406 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRIM23P36406 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRIM23P36406 AC015802.1-201ENST00000588104 1449 ntBASIC14.24□□□□□ -0.13
TRIM23P36406 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM23P36406 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRIM23P36406 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 AC232323.1-201ENST00000540724 2099 ntBASIC14.23□□□□□ -0.13
TRIM23P36406 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TRIM23P36406 OR2K2-202ENST00000374428 1038 ntBASIC14.23□□□□□ -0.13
TRIM23P36406 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM23P36406 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM23P36406 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM23P36406 RPSAP15-201ENST00000448168 861 ntBASIC14.23□□□□□ -0.13
TRIM23P36406 EEF1DP6-201ENST00000449232 372 ntBASIC14.23□□□□□ -0.13
TRIM23P36406 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM23P36406 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM23P36406 RN7SL67P-201ENST00000492147 296 ntBASIC14.23□□□□□ -0.13
TRIM23P36406 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM23P36406 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.23□□□□□ -0.13
TRIM23P36406 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM23P36406 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM23P36406 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
TRIM23P36406 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 AC126755.1-201ENST00000525846 6405 ntBASIC14.23□□□□□ -0.13
TRIM23P36406 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 KRT8P31-201ENST00000504812 1408 ntBASIC14.23□□□□□ -0.13
TRIM23P36406 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM23P36406 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRIM23P36406 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM23P36406 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM23P36406 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM23P36406 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 KRT18P9-201ENST00000604826 1300 ntBASIC14.22□□□□□ -0.13
TRIM23P36406 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM23P36406 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRIM23P36406 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms