Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 AC131902.2-201ENST00000566892 2172 ntBASIC12.79□□□□□ -0.36
RAB3BP20337 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RAB3BP20337 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
RAB3BP20337 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
RAB3BP20337 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
RAB3BP20337 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.78□□□□□ -0.36
RAB3BP20337 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 FAM86LP-201ENST00000478302 853 ntBASIC12.78□□□□□ -0.36
RAB3BP20337 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.78□□□□□ -0.36
RAB3BP20337 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.78□□□□□ -0.36
RAB3BP20337 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RAB3BP20337 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.78□□□□□ -0.36
RAB3BP20337 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
RAB3BP20337 AC036164.1-201ENST00000570544 333 ntBASIC12.78□□□□□ -0.36
RAB3BP20337 AC138761.1-201ENST00000584393 385 ntBASIC12.78□□□□□ -0.36
RAB3BP20337 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.78□□□□□ -0.36
RAB3BP20337 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.78□□□□□ -0.36
RAB3BP20337 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RAB3BP20337 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RAB3BP20337 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
RAB3BP20337 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RAB3BP20337 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RAB3BP20337 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
RAB3BP20337 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
RAB3BP20337 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
RAB3BP20337 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB3BP20337 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RAB3BP20337 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB3BP20337 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RAB3BP20337 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB3BP20337 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB3BP20337 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RAB3BP20337 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB3BP20337 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB3BP20337 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB3BP20337 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB3BP20337 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB3BP20337 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB3BP20337 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB3BP20337 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB3BP20337 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
RAB3BP20337 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RAB3BP20337 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB3BP20337 AL139400.1-201ENST00000366220 510 ntBASIC12.77□□□□□ -0.37
RAB3BP20337 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
RAB3BP20337 AL391647.1-201ENST00000395664 511 ntBASIC12.77□□□□□ -0.37
RAB3BP20337 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RAB3BP20337 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.77□□□□□ -0.37
RAB3BP20337 AC114501.2-201ENST00000439631 535 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms