Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-EP13747 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.66□□□□□ -0.06
HLA-EP13747 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-EP13747 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.66□□□□□ -0.06
HLA-EP13747 AL022334.2-201ENST00000610000 484 ntBASIC14.66□□□□□ -0.06
HLA-EP13747 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-EP13747 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-EP13747 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
HLA-EP13747 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-EP13747 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-EP13747 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-EP13747 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-EP13747 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HLA-EP13747 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-EP13747 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-EP13747 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-EP13747 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-EP13747 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-EP13747 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-EP13747 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-EP13747 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-EP13747 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-EP13747 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-EP13747 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-EP13747 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-EP13747 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 AC015656.1-201ENST00000624209 3578 ntBASIC14.65□□□□□ -0.06
HLA-EP13747 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.65□□□□□ -0.06
HLA-EP13747 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-EP13747 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HLA-EP13747 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HLA-EP13747 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
HLA-EP13747 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 AP000356.3-201ENST00000382243 753 ntBASIC14.65□□□□□ -0.06
HLA-EP13747 AC026316.1-201ENST00000398900 414 ntBASIC14.65□□□□□ -0.06
HLA-EP13747 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 DUX4L50-201ENST00000455245 715 ntBASIC14.65□□□□□ -0.06
HLA-EP13747 AP000358.1-201ENST00000456260 156 ntBASIC14.65□□□□□ -0.06
HLA-EP13747 RN7SL530P-201ENST00000485097 298 ntBASIC14.65□□□□□ -0.06
HLA-EP13747 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
HLA-EP13747 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 AC073352.2-201ENST00000609385 439 ntBASIC14.65□□□□□ -0.06
HLA-EP13747 AL805961.1-201ENST00000642026 753 ntBASIC14.65□□□□□ -0.06
HLA-EP13747 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-EP13747 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HLA-EP13747 KRT18P9-201ENST00000604826 1300 ntBASIC14.65□□□□□ -0.06
HLA-EP13747 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HLA-EP13747 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-EP13747 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HLA-EP13747 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-EP13747 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.65□□□□□ -0.07
HLA-EP13747 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-EP13747 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-EP13747 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-EP13747 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-EP13747 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-EP13747 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-EP13747 AC007686.3-201ENST00000619017 3487 ntBASIC14.64□□□□□ -0.07
HLA-EP13747 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HLA-EP13747 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-EP13747 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms