Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 ACKR1-201ENST00000368121 1240 ntBASIC13.17□□□□□ -0.3
CLUP10909 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLUP10909 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLUP10909 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLUP10909 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.17□□□□□ -0.3
CLUP10909 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLUP10909 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.17□□□□□ -0.3
CLUP10909 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLUP10909 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.17□□□□□ -0.3
CLUP10909 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLUP10909 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLUP10909 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.17□□□□□ -0.3
CLUP10909 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLUP10909 AP001063.1-201ENST00000568332 529 ntBASIC13.17□□□□□ -0.3
CLUP10909 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.17□□□□□ -0.3
CLUP10909 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLUP10909 AP001002.3-201ENST00000623482 206 ntBASIC13.17□□□□□ -0.3
CLUP10909 CU634019.7-201ENST00000624153 1185 ntBASIC13.17□□□□□ -0.3
CLUP10909 FP236241.2-201ENST00000624906 1185 ntBASIC13.17□□□□□ -0.3
CLUP10909 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.17□□□□□ -0.3
CLUP10909 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.17□□□□□ -0.3
CLUP10909 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.17□□□□□ -0.3
CLUP10909 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLUP10909 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.17□□□□□ -0.3
CLUP10909 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.17□□□□□ -0.3
CLUP10909 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLUP10909 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLUP10909 KHSRPP1-201ENST00000427983 1768 ntBASIC13.17□□□□□ -0.3
CLUP10909 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLUP10909 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLUP10909 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLUP10909 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLUP10909 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
CLUP10909 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CLUP10909 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.16□□□□□ -0.3
CLUP10909 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLUP10909 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLUP10909 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLUP10909 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
CLUP10909 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.16□□□□□ -0.3
CLUP10909 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.16□□□□□ -0.3
CLUP10909 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.16□□□□□ -0.3
CLUP10909 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
CLUP10909 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.16□□□□□ -0.3
CLUP10909 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.16□□□□□ -0.3
CLUP10909 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.16□□□□□ -0.3
CLUP10909 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.16□□□□□ -0.3
CLUP10909 AC008494.3-201ENST00000606615 944 ntBASIC13.16□□□□□ -0.3
CLUP10909 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 WFDC1-204ENST00000613603 549 ntBASIC13.16□□□□□ -0.3
CLUP10909 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLUP10909 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.16□□□□□ -0.3
CLUP10909 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CLUP10909 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLUP10909 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.16□□□□□ -0.3
CLUP10909 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLUP10909 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.16□□□□□ -0.3
CLUP10909 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.16□□□□□ -0.3
CLUP10909 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLUP10909 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLUP10909 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.16□□□□□ -0.3
CLUP10909 AC009093.2-202ENST00000620513 2079 ntBASIC13.16□□□□□ -0.3
CLUP10909 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLUP10909 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.15□□□□□ -0.3
CLUP10909 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.15□□□□□ -0.3
CLUP10909 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.15□□□□□ -0.3
CLUP10909 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms