Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SEMA4AQ9H3S1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
SEMA4AQ9H3S1 ABCB10P4-201ENST00000566803 2184 ntBASIC24.04■■□□□ 1.44
SEMA4AQ9H3S1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
SEMA4AQ9H3S1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.04■■□□□ 1.44
SEMA4AQ9H3S1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.04■■□□□ 1.44
SEMA4AQ9H3S1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SEMA4AQ9H3S1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.03■■□□□ 1.44
SEMA4AQ9H3S1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
SEMA4AQ9H3S1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SEMA4AQ9H3S1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.03■■□□□ 1.44
SEMA4AQ9H3S1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SEMA4AQ9H3S1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.03■■□□□ 1.44
SEMA4AQ9H3S1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SEMA4AQ9H3S1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.02■■□□□ 1.44
SEMA4AQ9H3S1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
SEMA4AQ9H3S1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SEMA4AQ9H3S1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SEMA4AQ9H3S1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.02■■□□□ 1.44
SEMA4AQ9H3S1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.02■■□□□ 1.44
SEMA4AQ9H3S1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.02■■□□□ 1.44
SEMA4AQ9H3S1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SEMA4AQ9H3S1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SEMA4AQ9H3S1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.02■■□□□ 1.44
SEMA4AQ9H3S1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SEMA4AQ9H3S1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SEMA4AQ9H3S1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SEMA4AQ9H3S1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SEMA4AQ9H3S1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.01■■□□□ 1.43
SEMA4AQ9H3S1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.01■■□□□ 1.43
SEMA4AQ9H3S1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SEMA4AQ9H3S1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24■■□□□ 1.43
SEMA4AQ9H3S1 MIR4281-201ENST00000580852 62 ntBASIC24■■□□□ 1.43
SEMA4AQ9H3S1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24■■□□□ 1.43
SEMA4AQ9H3S1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24■■□□□ 1.43
SEMA4AQ9H3S1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.99■■□□□ 1.43
SEMA4AQ9H3S1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.99■■□□□ 1.43
SEMA4AQ9H3S1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SEMA4AQ9H3S1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.99■■□□□ 1.43
SEMA4AQ9H3S1 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.99■■□□□ 1.43
SEMA4AQ9H3S1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.99■■□□□ 1.43
SEMA4AQ9H3S1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.99■■□□□ 1.43
SEMA4AQ9H3S1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SEMA4AQ9H3S1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SEMA4AQ9H3S1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SEMA4AQ9H3S1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.98■■□□□ 1.43
SEMA4AQ9H3S1 EDA-201ENST00000338901 1233 ntBASIC23.98■■□□□ 1.43
SEMA4AQ9H3S1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.98■■□□□ 1.43
SEMA4AQ9H3S1 MIR6821-201ENST00000617625 74 ntBASIC23.98■■□□□ 1.43
SEMA4AQ9H3S1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SEMA4AQ9H3S1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SEMA4AQ9H3S1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SEMA4AQ9H3S1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SEMA4AQ9H3S1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
SEMA4AQ9H3S1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.97■■□□□ 1.43
SEMA4AQ9H3S1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.97■■□□□ 1.43
SEMA4AQ9H3S1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SEMA4AQ9H3S1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
SEMA4AQ9H3S1 AL031432.3-201ENST00000607698 485 ntBASIC23.97■■□□□ 1.43
SEMA4AQ9H3S1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SEMA4AQ9H3S1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SEMA4AQ9H3S1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SEMA4AQ9H3S1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.96■■□□□ 1.43
SEMA4AQ9H3S1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
SEMA4AQ9H3S1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SEMA4AQ9H3S1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.96■■□□□ 1.43
SEMA4AQ9H3S1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.96■■□□□ 1.43
SEMA4AQ9H3S1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SEMA4AQ9H3S1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SEMA4AQ9H3S1 MIR6089-201ENST00000616698 64 ntBASIC23.96■■□□□ 1.43
SEMA4AQ9H3S1 C9orf163-202ENST00000624034 2573 ntBASIC23.96■■□□□ 1.43
SEMA4AQ9H3S1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SEMA4AQ9H3S1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
SEMA4AQ9H3S1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.95■■□□□ 1.42
SEMA4AQ9H3S1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SEMA4AQ9H3S1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SEMA4AQ9H3S1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.95■■□□□ 1.42
SEMA4AQ9H3S1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.95■■□□□ 1.42
SEMA4AQ9H3S1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SEMA4AQ9H3S1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SEMA4AQ9H3S1 AL355001.2-201ENST00000620617 1191 ntBASIC23.95■■□□□ 1.42
SEMA4AQ9H3S1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.95■■□□□ 1.42
SEMA4AQ9H3S1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.95■■□□□ 1.42
SEMA4AQ9H3S1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SEMA4AQ9H3S1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SEMA4AQ9H3S1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SEMA4AQ9H3S1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.94■■□□□ 1.42
SEMA4AQ9H3S1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
SEMA4AQ9H3S1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SEMA4AQ9H3S1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.94■■□□□ 1.42
SEMA4AQ9H3S1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.94■■□□□ 1.42
SEMA4AQ9H3S1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SEMA4AQ9H3S1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SEMA4AQ9H3S1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SEMA4AQ9H3S1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SEMA4AQ9H3S1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SEMA4AQ9H3S1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.93■■□□□ 1.42
SEMA4AQ9H3S1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.93■■□□□ 1.42
SEMA4AQ9H3S1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SEMA4AQ9H3S1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms