Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYNPOQ8N3V7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SYNPOQ8N3V7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SYNPOQ8N3V7 MIR3181-201ENST00000578512 73 ntBASIC23.15■■□□□ 1.3
SYNPOQ8N3V7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
SYNPOQ8N3V7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.15■■□□□ 1.3
SYNPOQ8N3V7 AC009086.3-201ENST00000623486 1008 ntBASIC23.15■■□□□ 1.3
SYNPOQ8N3V7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SYNPOQ8N3V7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.14■■□□□ 1.3
SYNPOQ8N3V7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SYNPOQ8N3V7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.14■■□□□ 1.29
SYNPOQ8N3V7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SYNPOQ8N3V7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SYNPOQ8N3V7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SYNPOQ8N3V7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.13■■□□□ 1.29
SYNPOQ8N3V7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SYNPOQ8N3V7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SYNPOQ8N3V7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.13■■□□□ 1.29
SYNPOQ8N3V7 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.13■■□□□ 1.29
SYNPOQ8N3V7 AC034268.1-201ENST00000441047 882 ntBASIC23.13■■□□□ 1.29
SYNPOQ8N3V7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SYNPOQ8N3V7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.13■■□□□ 1.29
SYNPOQ8N3V7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SYNPOQ8N3V7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.13■■□□□ 1.29
SYNPOQ8N3V7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SYNPOQ8N3V7 SLC6A10P-202ENST00000431994 2058 ntBASIC23.12■■□□□ 1.29
SYNPOQ8N3V7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SYNPOQ8N3V7 AC006455.2-201ENST00000429931 906 ntBASIC23.12■■□□□ 1.29
SYNPOQ8N3V7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SYNPOQ8N3V7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.12■■□□□ 1.29
SYNPOQ8N3V7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.12■■□□□ 1.29
SYNPOQ8N3V7 AL161729.1-201ENST00000604104 1402 ntBASIC23.12■■□□□ 1.29
SYNPOQ8N3V7 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.12■■□□□ 1.29
SYNPOQ8N3V7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SYNPOQ8N3V7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SYNPOQ8N3V7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.11■■□□□ 1.29
SYNPOQ8N3V7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SYNPOQ8N3V7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.11■■□□□ 1.29
SYNPOQ8N3V7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.11■■□□□ 1.29
SYNPOQ8N3V7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.11■■□□□ 1.29
SYNPOQ8N3V7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.11■■□□□ 1.29
SYNPOQ8N3V7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYNPOQ8N3V7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYNPOQ8N3V7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYNPOQ8N3V7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYNPOQ8N3V7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.1■■□□□ 1.29
SYNPOQ8N3V7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYNPOQ8N3V7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYNPOQ8N3V7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SYNPOQ8N3V7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.1■■□□□ 1.29
SYNPOQ8N3V7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
SYNPOQ8N3V7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SYNPOQ8N3V7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SYNPOQ8N3V7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SYNPOQ8N3V7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SYNPOQ8N3V7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SYNPOQ8N3V7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.09■■□□□ 1.29
SYNPOQ8N3V7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SYNPOQ8N3V7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.09■■□□□ 1.29
SYNPOQ8N3V7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SYNPOQ8N3V7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
SYNPOQ8N3V7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SYNPOQ8N3V7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.08■■□□□ 1.29
SYNPOQ8N3V7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.08■■□□□ 1.29
SYNPOQ8N3V7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SYNPOQ8N3V7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SYNPOQ8N3V7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SYNPOQ8N3V7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SYNPOQ8N3V7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SYNPOQ8N3V7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.07■■□□□ 1.28
SYNPOQ8N3V7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.07■■□□□ 1.28
SYNPOQ8N3V7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SYNPOQ8N3V7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SYNPOQ8N3V7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.07■■□□□ 1.28
SYNPOQ8N3V7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.07■■□□□ 1.28
SYNPOQ8N3V7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
SYNPOQ8N3V7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.07■■□□□ 1.28
SYNPOQ8N3V7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 YBX1P1-201ENST00000445822 960 ntBASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 AC126544.1-201ENST00000580842 1059 ntBASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.06■■□□□ 1.28
SYNPOQ8N3V7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SYNPOQ8N3V7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.05■■□□□ 1.28
SYNPOQ8N3V7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SYNPOQ8N3V7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
SYNPOQ8N3V7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
SYNPOQ8N3V7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SYNPOQ8N3V7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.05■■□□□ 1.28
SYNPOQ8N3V7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.05■■□□□ 1.28
SYNPOQ8N3V7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.05■■□□□ 1.28
SYNPOQ8N3V7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms