Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SMC5Q8IY18 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
SMC5Q8IY18 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.11
SMC5Q8IY18 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SMC5Q8IY18 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SMC5Q8IY18 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
SMC5Q8IY18 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.24■■■□□ 2.11
SMC5Q8IY18 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SMC5Q8IY18 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.24■■■□□ 2.11
SMC5Q8IY18 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
SMC5Q8IY18 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SMC5Q8IY18 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC28.23■■■□□ 2.11
SMC5Q8IY18 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
SMC5Q8IY18 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SMC5Q8IY18 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SMC5Q8IY18 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SMC5Q8IY18 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SMC5Q8IY18 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.22■■■□□ 2.11
SMC5Q8IY18 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SMC5Q8IY18 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SMC5Q8IY18 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
SMC5Q8IY18 KRT8P33-201ENST00000508125 1423 ntBASIC28.21■■■□□ 2.11
SMC5Q8IY18 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC28.21■■■□□ 2.11
SMC5Q8IY18 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
SMC5Q8IY18 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SMC5Q8IY18 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
SMC5Q8IY18 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.21■■■□□ 2.11
SMC5Q8IY18 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SMC5Q8IY18 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SMC5Q8IY18 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SMC5Q8IY18 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SMC5Q8IY18 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC28.19■■■□□ 2.1
SMC5Q8IY18 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SMC5Q8IY18 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SMC5Q8IY18 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.19■■■□□ 2.1
SMC5Q8IY18 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SMC5Q8IY18 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
SMC5Q8IY18 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SMC5Q8IY18 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SMC5Q8IY18 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SMC5Q8IY18 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
SMC5Q8IY18 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SMC5Q8IY18 SNX5-217ENST00000606557 1087 ntBASIC28.18■■■□□ 2.1
SMC5Q8IY18 AC137630.3-201ENST00000607245 391 ntBASIC28.18■■■□□ 2.1
SMC5Q8IY18 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SMC5Q8IY18 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SMC5Q8IY18 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SMC5Q8IY18 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SMC5Q8IY18 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SMC5Q8IY18 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.17■■■□□ 2.1
SMC5Q8IY18 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
SMC5Q8IY18 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SMC5Q8IY18 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.17■■■□□ 2.1
SMC5Q8IY18 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SMC5Q8IY18 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
SMC5Q8IY18 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SMC5Q8IY18 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.17■■■□□ 2.1
SMC5Q8IY18 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.17■■■□□ 2.1
SMC5Q8IY18 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.17■■■□□ 2.1
SMC5Q8IY18 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.17■■■□□ 2.1
SMC5Q8IY18 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SMC5Q8IY18 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SMC5Q8IY18 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SMC5Q8IY18 YBX1P4-201ENST00000392794 808 ntBASIC28.16■■■□□ 2.1
SMC5Q8IY18 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
SMC5Q8IY18 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.16■■■□□ 2.1
SMC5Q8IY18 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC28.16■■■□□ 2.1
SMC5Q8IY18 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.16■■■□□ 2.1
SMC5Q8IY18 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC28.16■■■□□ 2.1
SMC5Q8IY18 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SMC5Q8IY18 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMC5Q8IY18 GALC-202ENST00000393568 2054 ntTSL 2 BASIC28.15■■■□□ 2.1
SMC5Q8IY18 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SMC5Q8IY18 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMC5Q8IY18 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMC5Q8IY18 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SMC5Q8IY18 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.14■■■□□ 2.1
SMC5Q8IY18 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
SMC5Q8IY18 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SMC5Q8IY18 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC28.14■■■□□ 2.1
SMC5Q8IY18 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SMC5Q8IY18 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.14■■■□□ 2.1
SMC5Q8IY18 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SMC5Q8IY18 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SMC5Q8IY18 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC28.14■■■□□ 2.09
SMC5Q8IY18 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SMC5Q8IY18 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC28.13■■■□□ 2.09
SMC5Q8IY18 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SMC5Q8IY18 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
SMC5Q8IY18 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
SMC5Q8IY18 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SMC5Q8IY18 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
SMC5Q8IY18 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SMC5Q8IY18 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
SMC5Q8IY18 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
SMC5Q8IY18 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SMC5Q8IY18 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SMC5Q8IY18 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SMC5Q8IY18 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.12■■■□□ 2.09
SMC5Q8IY18 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms