Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM53Q6P2H8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM53Q6P2H8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM53Q6P2H8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM53Q6P2H8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM53Q6P2H8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM53Q6P2H8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEM53Q6P2H8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM53Q6P2H8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM53Q6P2H8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM53Q6P2H8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TMEM53Q6P2H8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 AC138932.3-201ENST00000567634 1902 ntBASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM53Q6P2H8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM53Q6P2H8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM53Q6P2H8 AC022211.4-201ENST00000625094 2161 ntBASIC20.52■□□□□ 0.88
TMEM53Q6P2H8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM53Q6P2H8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM53Q6P2H8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.52■□□□□ 0.88
TMEM53Q6P2H8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM53Q6P2H8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM53Q6P2H8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM53Q6P2H8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.52■□□□□ 0.87
TMEM53Q6P2H8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
TMEM53Q6P2H8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM53Q6P2H8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 PVT1_1.1-201ENST00000615125 194 ntBASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM53Q6P2H8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.5■□□□□ 0.87
TMEM53Q6P2H8 YBX1P4-201ENST00000392794 808 ntBASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM53Q6P2H8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM53Q6P2H8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms