Protein–RNA interactions for Protein: P18077

RPL35A, 60S ribosomal protein L35a, humanhuman

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP18077 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.82■□□□□ 0.28
RPL35AP18077 AC131281.2-201ENST00000520478 145 ntBASIC16.82■□□□□ 0.28
RPL35AP18077 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.82■□□□□ 0.28
RPL35AP18077 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.82■□□□□ 0.28
RPL35AP18077 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPL35AP18077 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPL35AP18077 AL136116.3-201ENST00000402907 1138 ntBASIC16.81■□□□□ 0.28
RPL35AP18077 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.81■□□□□ 0.28
RPL35AP18077 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPL35AP18077 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPL35AP18077 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPL35AP18077 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPL35AP18077 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RPL35AP18077 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPL35AP18077 AL139125.2-201ENST00000623134 1869 ntBASIC16.8■□□□□ 0.28
RPL35AP18077 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPL35AP18077 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RPL35AP18077 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.8■□□□□ 0.28
RPL35AP18077 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.8■□□□□ 0.28
RPL35AP18077 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RPL35AP18077 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPL35AP18077 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPL35AP18077 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPL35AP18077 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPL35AP18077 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
RPL35AP18077 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPL35AP18077 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.79■□□□□ 0.28
RPL35AP18077 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPL35AP18077 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.79■□□□□ 0.28
RPL35AP18077 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPL35AP18077 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPL35AP18077 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPL35AP18077 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.79■□□□□ 0.28
RPL35AP18077 ALDH1A3-203ENST00000557963 1670 ntBASIC16.78■□□□□ 0.28
RPL35AP18077 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPL35AP18077 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPL35AP18077 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPL35AP18077 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPL35AP18077 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPL35AP18077 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.78■□□□□ 0.28
RPL35AP18077 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.78■□□□□ 0.28
RPL35AP18077 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPL35AP18077 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPL35AP18077 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPL35AP18077 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPL35AP18077 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPL35AP18077 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPL35AP18077 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPL35AP18077 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPL35AP18077 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.77■□□□□ 0.28
RPL35AP18077 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPL35AP18077 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RPL35AP18077 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.77■□□□□ 0.28
RPL35AP18077 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPL35AP18077 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.77■□□□□ 0.27
RPL35AP18077 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
RPL35AP18077 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RPL35AP18077 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPL35AP18077 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPL35AP18077 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPL35AP18077 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPL35AP18077 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RPL35AP18077 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPL35AP18077 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPL35AP18077 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPL35AP18077 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPL35AP18077 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPL35AP18077 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.76■□□□□ 0.27
RPL35AP18077 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.76■□□□□ 0.27
RPL35AP18077 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPL35AP18077 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPL35AP18077 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.76■□□□□ 0.27
RPL35AP18077 MIR4466-201ENST00000606121 54 ntBASIC16.76■□□□□ 0.27
RPL35AP18077 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPL35AP18077 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPL35AP18077 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPL35AP18077 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPL35AP18077 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPL35AP18077 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RPL35AP18077 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPL35AP18077 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.75■□□□□ 0.27
RPL35AP18077 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.75■□□□□ 0.27
RPL35AP18077 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPL35AP18077 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPL35AP18077 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.75■□□□□ 0.27
RPL35AP18077 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPL35AP18077 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.75■□□□□ 0.27
RPL35AP18077 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPL35AP18077 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPL35AP18077 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms