Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMPD2O60906 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMPD2O60906 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD2O60906 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SMPD2O60906 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.82■□□□□ 0.76
SMPD2O60906 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD2O60906 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.82■□□□□ 0.76
SMPD2O60906 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.82■□□□□ 0.76
SMPD2O60906 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.82■□□□□ 0.76
SMPD2O60906 MIR5787-201ENST00000611784 55 ntBASIC19.82■□□□□ 0.76
SMPD2O60906 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD2O60906 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SMPD2O60906 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SMPD2O60906 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD2O60906 EDA-201ENST00000338901 1233 ntBASIC19.81■□□□□ 0.76
SMPD2O60906 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.81■□□□□ 0.76
SMPD2O60906 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.81■□□□□ 0.76
SMPD2O60906 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD2O60906 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.81■□□□□ 0.76
SMPD2O60906 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD2O60906 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD2O60906 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.8■□□□□ 0.76
SMPD2O60906 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD2O60906 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD2O60906 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
SMPD2O60906 AL355001.2-201ENST00000620617 1191 ntBASIC19.8■□□□□ 0.76
SMPD2O60906 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD2O60906 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD2O60906 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.79■□□□□ 0.76
SMPD2O60906 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.79■□□□□ 0.76
SMPD2O60906 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.79■□□□□ 0.76
SMPD2O60906 SUDS3P1-201ENST00000505831 966 ntBASIC19.79■□□□□ 0.76
SMPD2O60906 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.79■□□□□ 0.76
SMPD2O60906 AC104564.3-201ENST00000582367 638 ntBASIC19.79■□□□□ 0.76
SMPD2O60906 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD2O60906 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.79■□□□□ 0.76
SMPD2O60906 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SMPD2O60906 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD2O60906 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD2O60906 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.78■□□□□ 0.76
SMPD2O60906 AC024257.2-201ENST00000549699 147 ntBASIC19.78■□□□□ 0.76
SMPD2O60906 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SMPD2O60906 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD2O60906 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
SMPD2O60906 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD2O60906 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SMPD2O60906 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SMPD2O60906 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.77■□□□□ 0.76
SMPD2O60906 AC004812.2-201ENST00000611079 2094 ntBASIC19.77■□□□□ 0.76
SMPD2O60906 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD2O60906 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD2O60906 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SMPD2O60906 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD2O60906 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD2O60906 AC026271.2-201ENST00000428091 497 ntBASIC19.77■□□□□ 0.76
SMPD2O60906 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.77■□□□□ 0.76
SMPD2O60906 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.77■□□□□ 0.76
SMPD2O60906 AL031432.3-201ENST00000607698 485 ntBASIC19.77■□□□□ 0.76
SMPD2O60906 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SMPD2O60906 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD2O60906 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD2O60906 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMPD2O60906 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SMPD2O60906 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD2O60906 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.76■□□□□ 0.75
SMPD2O60906 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD2O60906 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD2O60906 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD2O60906 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SMPD2O60906 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.76■□□□□ 0.75
SMPD2O60906 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD2O60906 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SMPD2O60906 AC093323.1-202ENST00000635031 2045 ntBASIC19.76■□□□□ 0.75
SMPD2O60906 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD2O60906 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD2O60906 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD2O60906 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SMPD2O60906 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD2O60906 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD2O60906 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
SMPD2O60906 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD2O60906 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD2O60906 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.75■□□□□ 0.75
SMPD2O60906 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD2O60906 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD2O60906 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD2O60906 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD2O60906 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SMPD2O60906 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SMPD2O60906 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SMPD2O60906 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.74■□□□□ 0.75
SMPD2O60906 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD2O60906 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD2O60906 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.74■□□□□ 0.75
SMPD2O60906 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SMPD2O60906 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD2O60906 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD2O60906 DUX4L19-201ENST00000557448 1267 ntBASIC19.74■□□□□ 0.75
SMPD2O60906 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.74■□□□□ 0.75
SMPD2O60906 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms