Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSNA1O43805 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SSNA1O43805 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSNA1O43805 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSNA1O43805 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSNA1O43805 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SSNA1O43805 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSNA1O43805 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSNA1O43805 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SSNA1O43805 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSNA1O43805 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSNA1O43805 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSNA1O43805 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSNA1O43805 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.31■□□□□ 0.68
SSNA1O43805 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSNA1O43805 AC092068.2-201ENST00000590491 1708 ntBASIC19.31■□□□□ 0.68
SSNA1O43805 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.3■□□□□ 0.68
SSNA1O43805 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSNA1O43805 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SSNA1O43805 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SSNA1O43805 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSNA1O43805 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSNA1O43805 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.3■□□□□ 0.68
SSNA1O43805 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SSNA1O43805 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SSNA1O43805 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSNA1O43805 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSNA1O43805 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSNA1O43805 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSNA1O43805 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSNA1O43805 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SSNA1O43805 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SSNA1O43805 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSNA1O43805 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SSNA1O43805 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSNA1O43805 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSNA1O43805 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSNA1O43805 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSNA1O43805 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSNA1O43805 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.29■□□□□ 0.68
SSNA1O43805 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSNA1O43805 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SSNA1O43805 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SSNA1O43805 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SSNA1O43805 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSNA1O43805 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSNA1O43805 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSNA1O43805 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SSNA1O43805 AC242852.2-201ENST00000615738 1807 ntBASIC19.28■□□□□ 0.68
SSNA1O43805 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSNA1O43805 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSNA1O43805 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.28■□□□□ 0.68
SSNA1O43805 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSNA1O43805 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSNA1O43805 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSNA1O43805 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSNA1O43805 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
SSNA1O43805 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSNA1O43805 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SSNA1O43805 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSNA1O43805 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.27■□□□□ 0.68
SSNA1O43805 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.27■□□□□ 0.68
SSNA1O43805 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSNA1O43805 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSNA1O43805 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.27■□□□□ 0.68
SSNA1O43805 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSNA1O43805 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.27■□□□□ 0.68
SSNA1O43805 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSNA1O43805 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSNA1O43805 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSNA1O43805 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSNA1O43805 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.26■□□□□ 0.67
SSNA1O43805 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSNA1O43805 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.26■□□□□ 0.67
SSNA1O43805 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSNA1O43805 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSNA1O43805 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SSNA1O43805 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSNA1O43805 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSNA1O43805 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.25■□□□□ 0.67
SSNA1O43805 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSNA1O43805 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSNA1O43805 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSNA1O43805 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSNA1O43805 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSNA1O43805 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSNA1O43805 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.24■□□□□ 0.67
SSNA1O43805 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSNA1O43805 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSNA1O43805 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.24■□□□□ 0.67
SSNA1O43805 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.24■□□□□ 0.67
SSNA1O43805 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSNA1O43805 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSNA1O43805 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSNA1O43805 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.24■□□□□ 0.67
SSNA1O43805 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SSNA1O43805 AL121603.2-201ENST00000557373 2117 ntBASIC19.24■□□□□ 0.67
SSNA1O43805 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSNA1O43805 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.23■□□□□ 0.67
SSNA1O43805 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms