Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF13O43567 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF13O43567 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF13O43567 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF13O43567 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
RNF13O43567 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF13O43567 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF13O43567 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RNF13O43567 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF13O43567 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF13O43567 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
RNF13O43567 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF13O43567 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF13O43567 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF13O43567 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF13O43567 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF13O43567 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF13O43567 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF13O43567 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF13O43567 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RNF13O43567 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF13O43567 AC103834.1-201ENST00000520383 144 ntBASIC20.56■□□□□ 0.88
RNF13O43567 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF13O43567 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF13O43567 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
RNF13O43567 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
RNF13O43567 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF13O43567 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF13O43567 CLDN5-201ENST00000403084 2357 ntBASIC20.56■□□□□ 0.88
RNF13O43567 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF13O43567 AC131274.2-201ENST00000580697 1507 ntBASIC20.55■□□□□ 0.88
RNF13O43567 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RNF13O43567 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF13O43567 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RNF13O43567 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF13O43567 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF13O43567 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF13O43567 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF13O43567 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
RNF13O43567 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF13O43567 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF13O43567 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF13O43567 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF13O43567 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF13O43567 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF13O43567 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF13O43567 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF13O43567 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF13O43567 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF13O43567 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF13O43567 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF13O43567 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF13O43567 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF13O43567 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF13O43567 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF13O43567 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF13O43567 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNF13O43567 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF13O43567 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF13O43567 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF13O43567 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF13O43567 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF13O43567 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF13O43567 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF13O43567 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF13O43567 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF13O43567 AF131216.4-201ENST00000638924 1588 ntBASIC20.52■□□□□ 0.88
RNF13O43567 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF13O43567 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF13O43567 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF13O43567 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF13O43567 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF13O43567 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF13O43567 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RNF13O43567 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RNF13O43567 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF13O43567 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RNF13O43567 AL117328.2-201ENST00000624617 1940 ntBASIC20.51■□□□□ 0.87
RNF13O43567 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF13O43567 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF13O43567 AC103724.3-201ENST00000564481 992 ntBASIC20.51■□□□□ 0.87
RNF13O43567 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RNF13O43567 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF13O43567 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF13O43567 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RNF13O43567 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.51■□□□□ 0.87
RNF13O43567 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF13O43567 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF13O43567 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF13O43567 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF13O43567 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF13O43567 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RNF13O43567 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF13O43567 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF13O43567 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF13O43567 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF13O43567 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RNF13O43567 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF13O43567 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF13O43567 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms