Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 TERT-206ENST00000508104 2486 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV22A0A0B4J277 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV22A0A0B4J277 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 AC138932.1-201ENST00000534164 6830 ntBASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV22A0A0B4J277 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV22A0A0B4J277 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRAV22A0A0B4J277 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRAV22A0A0B4J277 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
TRAV22A0A0B4J277 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
TRAV22A0A0B4J277 AC110285.7-201ENST00000624417 1536 ntBASIC12.83□□□□□ -0.35
TRAV22A0A0B4J277 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 EBPL-202ENST00000378268 680 ntTSL 3 BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 RPS2-209ENST00000529806 993 ntTSL 3 BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRAV22A0A0B4J277 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms