Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV20-1A0A075B6N2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 ZNRF2P1-201ENST00000441407 443 ntBASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRBV20-1A0A075B6N2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV20-1A0A075B6N2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV20-1A0A075B6N2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV20-1A0A075B6N2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV20-1A0A075B6N2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV20-1A0A075B6N2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV20-1A0A075B6N2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV20-1A0A075B6N2 AC135983.2-203ENST00000454486 1613 ntBASIC15.17■□□□□ 0.02
TRBV20-1A0A075B6N2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV20-1A0A075B6N2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC15.17■□□□□ 0.02
TRBV20-1A0A075B6N2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV20-1A0A075B6N2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV20-1A0A075B6N2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV20-1A0A075B6N2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 AC007952.6-201ENST00000573168 2673 ntBASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 AC003957.1-201ENST00000625108 2673 ntBASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms