Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 TNRC18P2-201ENST00000417666 2714 ntBASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 TBC1D3J-201ENST00000620719 1426 ntBASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 RNA5SP359-201ENST00000364838 113 ntBASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 LBH-202ENST00000401506 485 ntTSL 3 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 IGLV3-15-201ENST00000518356 244 ntBASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 AC016629.1-201ENST00000596579 586 ntBASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 AL109837.1-201ENST00000603272 613 ntBASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 AC021016.3-201ENST00000608367 477 ntBASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 LINC01783-202ENST00000614408 828 ntBASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 BX284668.2-205ENST00000619677 828 ntBASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 AL591471.1-201ENST00000621855 229 ntBASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00588Q9Y4M8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 AC015656.1-201ENST00000624209 3578 ntBASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 AC007686.3-201ENST00000619017 3487 ntBASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 MBP-201ENST00000354542 575 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 PARVG-202ENST00000415224 999 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00588Q9Y4M8 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms