Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PGAM1P11-201ENST00000416729 680 ntBASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 FAM197Y6-201ENST00000420524 766 ntBASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 MIR2278-201ENST00000516344 96 ntBASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 SRP14-208ENST00000560773 468 ntTSL 3 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 NIFKP4-201ENST00000567275 1192 ntBASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 MIR4254-201ENST00000581063 76 ntBASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 AC008536.3-201ENST00000623282 1599 ntBASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 COQ4-204ENST00000608951 781 ntTSL 2 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 AC139712.1-201ENST00000378256 1875 ntBASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 ODCP-201ENST00000459650 1639 ntBASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 AC023157.3-201ENST00000619086 2088 ntBASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZC3H4Q9UPT8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 AC138761.6-201ENST00000583997 1423 ntBASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 DKKL1P1-201ENST00000400550 698 ntBASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 AC006987.1-201ENST00000413610 527 ntBASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 RPL14-203ENST00000416518 812 ntTSL 3 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 AP000244.1-201ENST00000424582 201 ntBASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 RN7SL788P-201ENST00000460504 316 ntBASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 AC142086.5-202ENST00000562500 217 ntBASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 NEK4P3-201ENST00000604859 544 ntBASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 AC244517.3-201ENST00000616254 1235 ntBASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZC3H4Q9UPT8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms