Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EFCC1Q9HA90 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.94■□□□□ 0.3
EFCC1Q9HA90 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.94■□□□□ 0.3
EFCC1Q9HA90 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.94■□□□□ 0.3
EFCC1Q9HA90 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.94■□□□□ 0.3
EFCC1Q9HA90 BX088702.1-201ENST00000610784 235 ntBASIC16.94■□□□□ 0.3
EFCC1Q9HA90 AC018695.6-201ENST00000614011 534 ntBASIC16.94■□□□□ 0.3
EFCC1Q9HA90 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFCC1Q9HA90 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFCC1Q9HA90 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFCC1Q9HA90 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.94■□□□□ 0.3
EFCC1Q9HA90 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
EFCC1Q9HA90 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 LINC01165-201ENST00000445190 1623 ntBASIC16.93■□□□□ 0.3
EFCC1Q9HA90 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 MRPL22P1-201ENST00000505398 616 ntBASIC16.93■□□□□ 0.3
EFCC1Q9HA90 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 CR383656.3-201ENST00000551315 183 ntBASIC16.93■□□□□ 0.3
EFCC1Q9HA90 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 EIF5AP2-201ENST00000585668 1047 ntBASIC16.93■□□□□ 0.3
EFCC1Q9HA90 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 AC009560.1-201ENST00000620208 434 ntBASIC16.93■□□□□ 0.3
EFCC1Q9HA90 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 IL9RP3-201ENST00000442856 1674 ntBASIC16.93■□□□□ 0.3
EFCC1Q9HA90 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFCC1Q9HA90 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 TSPY25P-201ENST00000429463 745 ntBASIC16.92■□□□□ 0.3
EFCC1Q9HA90 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 FTH1P22-201ENST00000456305 520 ntBASIC16.92■□□□□ 0.3
EFCC1Q9HA90 ORAOV1P1-201ENST00000503108 395 ntBASIC16.92■□□□□ 0.3
EFCC1Q9HA90 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 MIR3188-201ENST00000583494 85 ntBASIC16.92■□□□□ 0.3
EFCC1Q9HA90 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.92■□□□□ 0.3
EFCC1Q9HA90 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms