Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 AC093004.1-201ENST00000508850 424 ntBASIC14.04□□□□□ -0.16
VPS33AQ96AX1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 AC005498.2-205ENST00000593218 784 ntBASIC14.04□□□□□ -0.16
VPS33AQ96AX1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 AC093726.1-201ENST00000608064 963 ntBASIC14.04□□□□□ -0.16
VPS33AQ96AX1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 AP001002.3-201ENST00000623482 206 ntBASIC14.04□□□□□ -0.16
VPS33AQ96AX1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 MIR193BHG-211ENST00000641433 5365 ntBASIC14.04□□□□□ -0.16
VPS33AQ96AX1 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 AC092053.3-201ENST00000641308 4975 ntBASIC14.03□□□□□ -0.16
VPS33AQ96AX1 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 LINC02486-201ENST00000604157 3000 ntBASIC14.03□□□□□ -0.16
VPS33AQ96AX1 Z82170.1-201ENST00000625081 3192 ntBASIC14.03□□□□□ -0.16
VPS33AQ96AX1 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 AC123567.1-201ENST00000548294 1261 ntBASIC14.03□□□□□ -0.16
VPS33AQ96AX1 SORD2P-201ENST00000558556 1069 ntBASIC14.03□□□□□ -0.16
VPS33AQ96AX1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 AC139530.3-201ENST00000620344 690 ntBASIC14.03□□□□□ -0.16
VPS33AQ96AX1 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.03□□□□□ -0.16
VPS33AQ96AX1 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.03□□□□□ -0.16
VPS33AQ96AX1 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 AC118758.2-201ENST00000614242 2813 ntBASIC14.03□□□□□ -0.16
VPS33AQ96AX1 AC019294.4-201ENST00000561777 2905 ntBASIC14.03□□□□□ -0.16
VPS33AQ96AX1 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS33AQ96AX1 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms