Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB3IL1Q8TBN0 BTBD7P1-201ENST00000447253 1453 ntBASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 RPL13AP25-201ENST00000484130 612 ntBASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 AC109322.1-201ENST00000524499 1264 ntBASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 AC036164.1-201ENST00000570544 333 ntBASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IL1Q8TBN0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 FAM86LP-201ENST00000478302 853 ntBASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 HLA-J-203ENST00000494367 1087 ntBASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 SORD2P-201ENST00000558556 1069 ntBASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 AC103988.2-201ENST00000561804 725 ntBASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 AL049840.4-201ENST00000602422 811 ntBASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 AC114271.1-201ENST00000612689 2813 ntBASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 AL139385.1-201ENST00000611744 3272 ntBASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 AC072061.1-201ENST00000569710 2234 ntBASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IL1Q8TBN0 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms