Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT20P35900 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT20P35900 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.93□□□□□ -0.18
KRT20P35900 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
KRT20P35900 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 FP325330.2-201ENST00000624219 5630 ntBASIC13.93□□□□□ -0.18
KRT20P35900 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
KRT20P35900 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.93□□□□□ -0.18
KRT20P35900 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
KRT20P35900 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.93□□□□□ -0.18
KRT20P35900 BOLA2P3-201ENST00000404566 256 ntBASIC13.93□□□□□ -0.18
KRT20P35900 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.93□□□□□ -0.18
KRT20P35900 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.93□□□□□ -0.18
KRT20P35900 AC245100.3-201ENST00000441281 285 ntBASIC13.93□□□□□ -0.18
KRT20P35900 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
KRT20P35900 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.93□□□□□ -0.18
KRT20P35900 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.93□□□□□ -0.18
KRT20P35900 RN7SL48P-201ENST00000579283 293 ntBASIC13.93□□□□□ -0.18
KRT20P35900 RPSAP52-203ENST00000622976 1023 ntBASIC13.93□□□□□ -0.18
KRT20P35900 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.93□□□□□ -0.18
KRT20P35900 AL139385.1-201ENST00000611744 3272 ntBASIC13.93□□□□□ -0.18
KRT20P35900 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.93□□□□□ -0.18
KRT20P35900 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 STRCP1-201ENST00000509801 5328 ntBASIC13.93□□□□□ -0.18
KRT20P35900 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
KRT20P35900 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.93□□□□□ -0.18
KRT20P35900 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.93□□□□□ -0.18
KRT20P35900 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 PPT1-213ENST00000641319 2388 ntBASIC13.93□□□□□ -0.18
KRT20P35900 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT20P35900 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.92□□□□□ -0.18
KRT20P35900 AC118758.2-201ENST00000614242 2813 ntBASIC13.92□□□□□ -0.18
KRT20P35900 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.92□□□□□ -0.18
KRT20P35900 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.92□□□□□ -0.18
KRT20P35900 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.92□□□□□ -0.18
KRT20P35900 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
KRT20P35900 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.92□□□□□ -0.18
KRT20P35900 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.92□□□□□ -0.18
KRT20P35900 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
KRT20P35900 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
KRT20P35900 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
KRT20P35900 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.92□□□□□ -0.18
KRT20P35900 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.92□□□□□ -0.18
KRT20P35900 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 ENPP7P14-201ENST00000621765 1040 ntBASIC13.92□□□□□ -0.18
KRT20P35900 AC132938.4-201ENST00000623835 848 ntBASIC13.92□□□□□ -0.18
KRT20P35900 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
KRT20P35900 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.92□□□□□ -0.18
KRT20P35900 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.92□□□□□ -0.18
KRT20P35900 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
KRT20P35900 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.92□□□□□ -0.18
KRT20P35900 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT20P35900 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.92□□□□□ -0.18
KRT20P35900 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms