Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AL137783.1-201ENST00000623494 1896 ntBASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AC011742.3-201ENST00000439053 820 ntBASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 RN7SL163P-201ENST00000583100 276 ntBASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AL136295.7-201ENST00000619226 1200 ntBASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 CU633904.3-201ENST00000624042 1029 ntBASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 AC002472.3-201ENST00000640124 621 ntBASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 REXO1L4P-201ENST00000605109 1937 ntBASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNYL3P0C7X3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 AC087386.2-201ENST00000623212 4637 ntBASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 AC016700.1-201ENST00000429424 312 ntBASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.16□□□□□ -0.14
CCNYL3P0C7X3 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms