RNA–Protein interactions for RNA: ENST00000474149.1

AC099542.2-201, humanhuman

TSL 2 BASIC

Gene AC099542.2, Length 553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC099542.2-201ENST00000474149 AEBP2Q6ZN18 517 aaPredicted RBP35.84■■■■□ 3.33
AC099542.2-201ENST00000474149 CHIC1Q5VXU3 224 aa35.03■■■■□ 3.2
AC099542.2-201ENST00000474149 PHF23Q9BUL5 403 aaPredicted RBP30.73■■■□□ 2.51
AC099542.2-201ENST00000474149 SENP3Q9H4L4 574 aaPredicted RBP30.54■■■□□ 2.48
AC099542.2-201ENST00000474149 PLPPR3Q6T4P5 718 aa28.47■■■□□ 2.15
AC099542.2-201ENST00000474149 FOXD1Q16676 465 aa28.27■■■□□ 2.12
AC099542.2-201ENST00000474149 PPP6R1Q9UPN7 881 aa27.12■■□□□ 1.93
AC099542.2-201ENST00000474149 ADRA2BP18089 450 aa27.11■■□□□ 1.93
AC099542.2-201ENST00000474149 NISCHQ9Y2I1 1504 aa26.74■■□□□ 1.87
AC099542.2-201ENST00000474149 PIAS4Q8N2W9 510 aaPredicted RBP26.7■■□□□ 1.86
AC099542.2-201ENST00000474149 MSH5O43196 834 aa26.18■■□□□ 1.78
AC099542.2-201ENST00000474149 PPP4R3CPQ6ZMV5 832 aa25.04■■□□□ 1.6
AC099542.2-201ENST00000474149 SCAF1Q9H7N4 1312 aaKnown RBP24.93■■□□□ 1.58
AC099542.2-201ENST00000474149 MAPK8IP2Q13387 824 aaPredicted RBP24.59■■□□□ 1.53
AC099542.2-201ENST00000474149 NCBP3Q53F19 620 aaKnown RBP24.44■■□□□ 1.5
AC099542.2-201ENST00000474149 KCNA4P22459 653 aa24.38■■□□□ 1.49
AC099542.2-201ENST00000474149 CNKSR2Q8WXI2 1034 aa24.38■■□□□ 1.49
AC099542.2-201ENST00000474149 DMRT2Q9Y5R5 561 aa24.34■■□□□ 1.49
AC099542.2-201ENST00000474149 NPM3O75607 178 aaKnown RBP24.01■■□□□ 1.43
AC099542.2-201ENST00000474149 RNF216Q9NWF9 866 aaPredicted RBP23.91■■□□□ 1.42
AC099542.2-201ENST00000474149 POTEDQ86YR6 584 aa23.84■■□□□ 1.41
AC099542.2-201ENST00000474149 HOXD11P31277 338 aaPredicted RBP23.82■■□□□ 1.4
AC099542.2-201ENST00000474149 CCDC180Q9P1Z9 1646 aa23.77■■□□□ 1.4
AC099542.2-201ENST00000474149 ABCC9O60706 1549 aa23.51■■□□□ 1.35
AC099542.2-201ENST00000474149 DNAJC5BQ9UF47 199 aa23.38■■□□□ 1.33
AC099542.2-201ENST00000474149 DCAF8L1A6NGE4 600 aa23.29■■□□□ 1.32
AC099542.2-201ENST00000474149 SLC4A1APQ9BWU0 796 aaKnown RBP23.25■■□□□ 1.31
AC099542.2-201ENST00000474149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.72■■□□□ 1.23
AC099542.2-201ENST00000474149 SLC4A2P04920 1241 aa22.65■■□□□ 1.22
AC099542.2-201ENST00000474149 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
AC099542.2-201ENST00000474149 EHMT2Q96KQ7 1210 aa22.51■■□□□ 1.19
AC099542.2-201ENST00000474149 FOXD4L1Q9NU39 408 aa22.51■■□□□ 1.19
AC099542.2-201ENST00000474149 RB1CC1Q8TDY2 1594 aa22.46■■□□□ 1.19
AC099542.2-201ENST00000474149 ZBTB22O15209 634 aa22.4■■□□□ 1.18
AC099542.2-201ENST00000474149 RNF39Q9H2S5 420 aa22.38■■□□□ 1.17
AC099542.2-201ENST00000474149 NACADO15069 1562 aa22.38■■□□□ 1.17
AC099542.2-201ENST00000474149 U3KPZ7 1027 aaPredicted RBP22.31■■□□□ 1.16
AC099542.2-201ENST00000474149 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
AC099542.2-201ENST00000474149 MYCNP04198 464 aaPredicted RBP22.24■■□□□ 1.15
AC099542.2-201ENST00000474149 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
AC099542.2-201ENST00000474149 C1QBPQ07021 282 aaKnown RBP22.15■■□□□ 1.14
AC099542.2-201ENST00000474149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.12■■□□□ 1.13
AC099542.2-201ENST00000474149 HNRNPUL2Q1KMD3 747 aaKnown RBP22.12■■□□□ 1.13
AC099542.2-201ENST00000474149 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
AC099542.2-201ENST00000474149 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
AC099542.2-201ENST00000474149 SAMD1Q6SPF0 538 aaPredicted RBP22.02■■□□□ 1.12
AC099542.2-201ENST00000474149 PABPN1Q86U42 306 aaKnown RBP eCLIP22.02■■□□□ 1.12
AC099542.2-201ENST00000474149 DCAF1Q9Y4B6 1507 aa22■■□□□ 1.11
AC099542.2-201ENST00000474149 APLP2Q06481 763 aa21.93■■□□□ 1.1
AC099542.2-201ENST00000474149 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
AC099542.2-201ENST00000474149 CACNB1Q02641 598 aaPredicted RBP21.84■■□□□ 1.09
AC099542.2-201ENST00000474149 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
AC099542.2-201ENST00000474149 ATXN8OSP0DMR3 200 aa21.76■■□□□ 1.07
AC099542.2-201ENST00000474149 SPINK5Q9NQ38 1064 aaPredicted RBP21.67■■□□□ 1.06
AC099542.2-201ENST00000474149 CAPN15O75808 1086 aa21.64■■□□□ 1.05
AC099542.2-201ENST00000474149 ZNF219Q9P2Y4 722 aaPredicted RBP21.58■■□□□ 1.05
AC099542.2-201ENST00000474149 ATF5Q9Y2D1 282 aaPredicted RBP21.53■■□□□ 1.04
AC099542.2-201ENST00000474149 TRHP20396 242 aaPredicted RBP21.51■■□□□ 1.03
AC099542.2-201ENST00000474149 SHROOM4Q9ULL8 1493 aa21.4■■□□□ 1.02
AC099542.2-201ENST00000474149 DSG3P32926 999 aa21.26■□□□□ 0.99
AC099542.2-201ENST00000474149 EIF4G1Q04637 1599 aaKnown RBP21.23■□□□□ 0.99
AC099542.2-201ENST00000474149 CC2D2AQ9P2K1 1620 aa21.21■□□□□ 0.99
AC099542.2-201ENST00000474149 ABCB7O75027 752 aa21.19■□□□□ 0.98
AC099542.2-201ENST00000474149 POLA2Q14181 598 aa21.15■□□□□ 0.98
AC099542.2-201ENST00000474149 CECR2Q9BXF3 1484 aa21.08■□□□□ 0.97
AC099542.2-201ENST00000474149 ZBTB12Q9Y330 459 aaPredicted RBP20.9■□□□□ 0.94
AC099542.2-201ENST00000474149 SMARCA4P51532 1647 aa20.79■□□□□ 0.92
AC099542.2-201ENST00000474149 FBLN2P98095 1184 aa20.77■□□□□ 0.92
AC099542.2-201ENST00000474149 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
AC099542.2-201ENST00000474149 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
AC099542.2-201ENST00000474149 MROH2BQ7Z745 1585 aa20.66■□□□□ 0.9
AC099542.2-201ENST00000474149 SMARCA2P51531 1590 aa20.64■□□□□ 0.9
AC099542.2-201ENST00000474149 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
AC099542.2-201ENST00000474149 MKRN4PQ13434 485 aaPredicted RBP20.62■□□□□ 0.89
AC099542.2-201ENST00000474149 BAZ1BQ9UIG0 1483 aaKnown RBP20.55■□□□□ 0.88
AC099542.2-201ENST00000474149 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
AC099542.2-201ENST00000474149 PEG3Q9GZU2 1588 aa20.48■□□□□ 0.87
AC099542.2-201ENST00000474149 WIZO95785 1651 aa20.48■□□□□ 0.87
AC099542.2-201ENST00000474149 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
AC099542.2-201ENST00000474149 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
AC099542.2-201ENST00000474149 RBM42Q9BTD8 480 aaKnown RBP20.36■□□□□ 0.85
AC099542.2-201ENST00000474149 NESP48681 1621 aa20.31■□□□□ 0.84
AC099542.2-201ENST00000474149 SPDYE2BA6NHP3 402 aa20.29■□□□□ 0.84
AC099542.2-201ENST00000474149 SPDYE6P0CI01 402 aa20.29■□□□□ 0.84
AC099542.2-201ENST00000474149 SPDYE2Q495Y8 402 aa20.29■□□□□ 0.84
AC099542.2-201ENST00000474149 ERCC6Q03468 1493 aa20.28■□□□□ 0.84
AC099542.2-201ENST00000474149 SPDYE4A6NLX3 237 aa20.2■□□□□ 0.82
AC099542.2-201ENST00000474149 ZNF692Q9BU19 519 aaPredicted RBP20.17■□□□□ 0.82
AC099542.2-201ENST00000474149 FKBP8Q14318 412 aa20.16■□□□□ 0.82
AC099542.2-201ENST00000474149 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
AC099542.2-201ENST00000474149 LAMC3Q9Y6N6 1575 aa20.13■□□□□ 0.81
AC099542.2-201ENST00000474149 SSUH2Q9Y2M2 353 aa20.1■□□□□ 0.81
AC099542.2-201ENST00000474149 CADPSQ9ULU8 1353 aa20.08■□□□□ 0.81
AC099542.2-201ENST00000474149 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
AC099542.2-201ENST00000474149 AKT1S1Q96B36 256 aa20.05■□□□□ 0.8
AC099542.2-201ENST00000474149 PDS5BQ9NTI5 1447 aa20.03■□□□□ 0.8
AC099542.2-201ENST00000474149 SUPT5HO00267 1087 aaKnown RBP19.98■□□□□ 0.79
AC099542.2-201ENST00000474149 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
AC099542.2-201ENST00000474149 CUX2O14529 1486 aa19.97■□□□□ 0.79
AC099542.2-201ENST00000474149 THOC2Q8NI27 1593 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms