Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
VTNP04004 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.83■□□□□ 0.12
VTNP04004 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
VTNP04004 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VTNP04004 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.82■□□□□ 0.12
VTNP04004 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.82■□□□□ 0.12
VTNP04004 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
VTNP04004 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.82■□□□□ 0.12
VTNP04004 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.82■□□□□ 0.12
VTNP04004 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.82■□□□□ 0.12
VTNP04004 AL627422.1-201ENST00000434104 580 ntBASIC15.82■□□□□ 0.12
VTNP04004 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.82■□□□□ 0.12
VTNP04004 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.82■□□□□ 0.12
VTNP04004 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.82■□□□□ 0.12
VTNP04004 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.82■□□□□ 0.12
VTNP04004 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.82■□□□□ 0.12
VTNP04004 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.82■□□□□ 0.12
VTNP04004 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.82■□□□□ 0.12
VTNP04004 MIR6842-201ENST00000612539 65 ntBASIC15.82■□□□□ 0.12
VTNP04004 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
VTNP04004 MIR7845-201ENST00000618396 99 ntBASIC15.82■□□□□ 0.12
VTNP04004 AC009560.1-201ENST00000620208 434 ntBASIC15.82■□□□□ 0.12
VTNP04004 COX6A1P2-201ENST00000620597 330 ntBASIC15.82■□□□□ 0.12
VTNP04004 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.82■□□□□ 0.12
VTNP04004 AC092978.1-202ENST00000637590 1327 ntBASIC15.82■□□□□ 0.12
VTNP04004 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.82■□□□□ 0.12
VTNP04004 LINC02228-204ENST00000642115 2962 ntBASIC15.82■□□□□ 0.12
VTNP04004 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.82■□□□□ 0.12
VTNP04004 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.82■□□□□ 0.12
VTNP04004 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 MYO15B-237ENST00000642007 4893 ntBASIC15.82■□□□□ 0.12
VTNP04004 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VTNP04004 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VTNP04004 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.82■□□□□ 0.12
VTNP04004 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VTNP04004 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VTNP04004 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
VTNP04004 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
VTNP04004 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VTNP04004 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
VTNP04004 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.81■□□□□ 0.12
VTNP04004 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.81■□□□□ 0.12
VTNP04004 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VTNP04004 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.81■□□□□ 0.12
VTNP04004 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 AC073869.2-201ENST00000417338 1026 ntBASIC15.81■□□□□ 0.12
VTNP04004 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
VTNP04004 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VTNP04004 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.81■□□□□ 0.12
VTNP04004 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.81■□□□□ 0.12
VTNP04004 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.81■□□□□ 0.12
VTNP04004 AC135983.4-201ENST00000564116 1262 ntBASIC15.81■□□□□ 0.12
VTNP04004 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.81■□□□□ 0.12
VTNP04004 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.81■□□□□ 0.12
VTNP04004 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VTNP04004 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms