Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
ALX3O95076 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ALX3O95076 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ALX3O95076 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ALX3O95076 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALX3O95076 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.99□□□□□ -0.33
ALX3O95076 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.99□□□□□ -0.33
ALX3O95076 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.99□□□□□ -0.33
ALX3O95076 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.99□□□□□ -0.33
ALX3O95076 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.99□□□□□ -0.33
ALX3O95076 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALX3O95076 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ALX3O95076 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALX3O95076 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALX3O95076 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ALX3O95076 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ALX3O95076 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 AGGF1P1-201ENST00000509500 2073 ntBASIC12.98□□□□□ -0.33
ALX3O95076 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ALX3O95076 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.98□□□□□ -0.33
ALX3O95076 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.98□□□□□ -0.33
ALX3O95076 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.98□□□□□ -0.33
ALX3O95076 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.98□□□□□ -0.33
ALX3O95076 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ALX3O95076 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ALX3O95076 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ALX3O95076 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ALX3O95076 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ALX3O95076 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.98□□□□□ -0.33
ALX3O95076 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.98□□□□□ -0.33
ALX3O95076 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.98□□□□□ -0.33
ALX3O95076 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.98□□□□□ -0.33
ALX3O95076 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.98□□□□□ -0.33
ALX3O95076 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.98□□□□□ -0.33
ALX3O95076 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.98□□□□□ -0.33
ALX3O95076 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 AC027307.3-201ENST00000594262 1100 ntBASIC12.98□□□□□ -0.33
ALX3O95076 MIR6799-201ENST00000620297 69 ntBASIC12.98□□□□□ -0.33
ALX3O95076 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.98□□□□□ -0.33
ALX3O95076 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.98□□□□□ -0.33
ALX3O95076 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.98□□□□□ -0.33
ALX3O95076 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ALX3O95076 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.98□□□□□ -0.33
ALX3O95076 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
ALX3O95076 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.98□□□□□ -0.33
ALX3O95076 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.98□□□□□ -0.33
ALX3O95076 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALX3O95076 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ALX3O95076 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.97□□□□□ -0.33
ALX3O95076 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
ALX3O95076 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 FAM90A12P-201ENST00000519497 2375 ntBASIC12.97□□□□□ -0.33
ALX3O95076 FAM90A24P-201ENST00000520792 2369 ntBASIC12.97□□□□□ -0.33
ALX3O95076 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.97□□□□□ -0.33
ALX3O95076 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 MIR943-201ENST00000401286 94 ntBASIC12.97□□□□□ -0.33
ALX3O95076 AL139094.1-201ENST00000405549 1188 ntBASIC12.97□□□□□ -0.33
ALX3O95076 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.97□□□□□ -0.33
ALX3O95076 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.97□□□□□ -0.33
ALX3O95076 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.97□□□□□ -0.33
ALX3O95076 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ALX3O95076 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALX3O95076 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms