Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 FMO6P-201ENST00000236166 1620 ntBASIC18.62■□□□□ 0.57
LTN1O94822 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC18.62■□□□□ 0.57
LTN1O94822 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LTN1O94822 ASS1P2-201ENST00000439895 1223 ntBASIC18.62■□□□□ 0.57
LTN1O94822 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC18.62■□□□□ 0.57
LTN1O94822 RPS18P9-201ENST00000482817 460 ntBASIC18.62■□□□□ 0.57
LTN1O94822 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC18.62■□□□□ 0.57
LTN1O94822 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC18.62■□□□□ 0.57
LTN1O94822 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC18.62■□□□□ 0.57
LTN1O94822 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LTN1O94822 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 AL390755.1-201ENST00000623716 2027 ntBASIC18.62■□□□□ 0.57
LTN1O94822 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
LTN1O94822 USP39-207ENST00000450066 2086 ntTSL 2 BASIC18.61■□□□□ 0.57
LTN1O94822 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LTN1O94822 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LTN1O94822 MIR1307-201ENST00000408840 149 ntBASIC18.61■□□□□ 0.57
LTN1O94822 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LTN1O94822 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
LTN1O94822 TBC1D3P6-201ENST00000505954 962 ntBASIC18.61■□□□□ 0.57
LTN1O94822 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 MIR5001-201ENST00000580185 100 ntBASIC18.61■□□□□ 0.57
LTN1O94822 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LTN1O94822 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LTN1O94822 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.61■□□□□ 0.57
LTN1O94822 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 TUBB4AP1-201ENST00000450755 1325 ntBASIC18.61■□□□□ 0.57
LTN1O94822 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC18.61■□□□□ 0.57
LTN1O94822 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTN1O94822 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.61■□□□□ 0.57
LTN1O94822 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LTN1O94822 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LTN1O94822 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC18.6■□□□□ 0.57
LTN1O94822 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC18.6■□□□□ 0.57
LTN1O94822 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
LTN1O94822 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
LTN1O94822 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LTN1O94822 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LTN1O94822 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC18.6■□□□□ 0.57
LTN1O94822 AC104961.1-201ENST00000427605 771 ntBASIC18.6■□□□□ 0.57
LTN1O94822 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 AC103563.1-201ENST00000429316 123 ntBASIC18.6■□□□□ 0.57
LTN1O94822 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC18.6■□□□□ 0.57
LTN1O94822 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC18.6■□□□□ 0.57
LTN1O94822 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC18.6■□□□□ 0.57
LTN1O94822 GARS-210ENST00000627489 324 ntTSL 4 BASIC18.6■□□□□ 0.57
LTN1O94822 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC18.6■□□□□ 0.57
LTN1O94822 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTN1O94822 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC18.59■□□□□ 0.57
LTN1O94822 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LTN1O94822 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC18.59■□□□□ 0.57
LTN1O94822 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC18.59■□□□□ 0.57
LTN1O94822 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
LTN1O94822 RCC2P1-201ENST00000452257 1476 ntBASIC18.59■□□□□ 0.57
LTN1O94822 SNORA57-201ENST00000383870 149 ntBASIC18.59■□□□□ 0.57
LTN1O94822 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 AF274858.1-201ENST00000406288 372 ntBASIC18.59■□□□□ 0.57
LTN1O94822 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC18.59■□□□□ 0.57
LTN1O94822 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms