Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GPC4O75487 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.67□□□□□ -0.06
GPC4O75487 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 RPL7P3-201ENST00000441388 714 ntBASIC14.67□□□□□ -0.06
GPC4O75487 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.67□□□□□ -0.06
GPC4O75487 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
GPC4O75487 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.67□□□□□ -0.06
GPC4O75487 AC131206.1-201ENST00000538078 1211 ntBASIC14.67□□□□□ -0.06
GPC4O75487 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.67□□□□□ -0.06
GPC4O75487 AC106820.3-201ENST00000561653 397 ntBASIC14.67□□□□□ -0.06
GPC4O75487 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.67□□□□□ -0.06
GPC4O75487 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.67□□□□□ -0.06
GPC4O75487 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GPC4O75487 AL512343.1-201ENST00000605837 169 ntBASIC14.67□□□□□ -0.06
GPC4O75487 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.67□□□□□ -0.06
GPC4O75487 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.67□□□□□ -0.06
GPC4O75487 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
GPC4O75487 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 INE2-201ENST00000630399 1874 ntBASIC14.67□□□□□ -0.06
GPC4O75487 AL354702.1-201ENST00000442006 1960 ntBASIC14.67□□□□□ -0.06
GPC4O75487 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
GPC4O75487 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.67□□□□□ -0.06
GPC4O75487 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 AC011840.2-201ENST00000563063 1520 ntBASIC14.66□□□□□ -0.06
GPC4O75487 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.66□□□□□ -0.06
GPC4O75487 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.66□□□□□ -0.06
GPC4O75487 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 MST1P2-201ENST00000457982 2291 ntBASIC14.66□□□□□ -0.06
GPC4O75487 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GPC4O75487 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.66□□□□□ -0.06
GPC4O75487 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.66□□□□□ -0.06
GPC4O75487 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
GPC4O75487 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.66□□□□□ -0.06
GPC4O75487 AL391280.1-201ENST00000506969 1062 ntBASIC14.66□□□□□ -0.06
GPC4O75487 AP003171.2-201ENST00000528208 925 ntBASIC14.66□□□□□ -0.06
GPC4O75487 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.66□□□□□ -0.06
GPC4O75487 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.66□□□□□ -0.06
GPC4O75487 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.66□□□□□ -0.06
GPC4O75487 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
GPC4O75487 RAB43P1-201ENST00000561790 589 ntBASIC14.66□□□□□ -0.06
GPC4O75487 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.66□□□□□ -0.06
GPC4O75487 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.66□□□□□ -0.06
GPC4O75487 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
GPC4O75487 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.66□□□□□ -0.06
GPC4O75487 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.66□□□□□ -0.06
GPC4O75487 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
GPC4O75487 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.66□□□□□ -0.06
GPC4O75487 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.66□□□□□ -0.06
GPC4O75487 PCDHA5-203ENST00000614258 4248 ntBASIC14.66□□□□□ -0.06
GPC4O75487 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GPC4O75487 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.66□□□□□ -0.06
GPC4O75487 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GPC4O75487 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms