Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 AC007686.3-201ENST00000619017 3487 ntBASIC21.06■□□□□ 0.96
HFM1A2PYH4 TEKT4P2-202ENST00000559466 1312 ntBASIC21.06■□□□□ 0.96
HFM1A2PYH4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC21.06■□□□□ 0.96
HFM1A2PYH4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC21.06■□□□□ 0.96
HFM1A2PYH4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC21.06■□□□□ 0.96
HFM1A2PYH4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
HFM1A2PYH4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC21.06■□□□□ 0.96
HFM1A2PYH4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC21.05■□□□□ 0.96
HFM1A2PYH4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC21.05■□□□□ 0.96
HFM1A2PYH4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 DNAJB1P1-201ENST00000429417 1024 ntBASIC21.05■□□□□ 0.96
HFM1A2PYH4 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC21.05■□□□□ 0.96
HFM1A2PYH4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC21.05■□□□□ 0.96
HFM1A2PYH4 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 AC087045.2-201ENST00000606279 1003 ntBASIC21.05■□□□□ 0.96
HFM1A2PYH4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 HPX-213ENST00000615166 826 ntTSL 5 BASIC21.05■□□□□ 0.96
HFM1A2PYH4 AC011491.1-203ENST00000637688 543 ntBASIC21.05■□□□□ 0.96
HFM1A2PYH4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC21.05■□□□□ 0.96
HFM1A2PYH4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
HFM1A2PYH4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC21.05■□□□□ 0.96
HFM1A2PYH4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
HFM1A2PYH4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HFM1A2PYH4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HFM1A2PYH4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HFM1A2PYH4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC21.05■□□□□ 0.96
HFM1A2PYH4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 RN7SL564P-201ENST00000496309 250 ntBASIC21.04■□□□□ 0.96
HFM1A2PYH4 AP002803.1-201ENST00000528836 498 ntBASIC21.04■□□□□ 0.96
HFM1A2PYH4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 COX6A1P2-201ENST00000620597 330 ntBASIC21.04■□□□□ 0.96
HFM1A2PYH4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 SCARNA12-201ENST00000459155 270 ntBASIC21.04■□□□□ 0.96
HFM1A2PYH4 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 AP000911.2-201ENST00000534330 502 ntBASIC21.04■□□□□ 0.96
HFM1A2PYH4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC21.04■□□□□ 0.96
HFM1A2PYH4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HFM1A2PYH4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HFM1A2PYH4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC21.03■□□□□ 0.96
HFM1A2PYH4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HFM1A2PYH4 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HFM1A2PYH4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HFM1A2PYH4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC21.03■□□□□ 0.96
HFM1A2PYH4 AC015909.5-201ENST00000624336 2266 ntBASIC21.03■□□□□ 0.96
HFM1A2PYH4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HFM1A2PYH4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
HFM1A2PYH4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HFM1A2PYH4 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HFM1A2PYH4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HFM1A2PYH4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HFM1A2PYH4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HFM1A2PYH4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HFM1A2PYH4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC21.03■□□□□ 0.96
HFM1A2PYH4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC21.03■□□□□ 0.96
HFM1A2PYH4 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC21.03■□□□□ 0.96
HFM1A2PYH4 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms