Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL805961.1-203ENST00000641078 1258 ntBASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 AC131212.3-201ENST00000624087 4219 ntBASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 FGFR3P5-201ENST00000564496 886 ntBASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 MIR4783-201ENST00000580343 82 ntBASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 AC113367.3-201ENST00000508316 1912 ntBASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA1Q9UND3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 AC087386.2-201ENST00000623212 4637 ntBASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 RN7SKP230-201ENST00000365642 335 ntBASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 ACTG1P2-201ENST00000415776 1125 ntBASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 ACTG1P11-201ENST00000425411 1125 ntBASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 RPL18P13-201ENST00000478088 569 ntBASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 AC090164.2-201ENST00000611487 516 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms