Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 AP005018.1-201ENST00000525475 301 ntBASIC12.93□□□□□ -0.34
DUX4Q9UBX2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 AL391825.1-201ENST00000457671 1364 ntBASIC12.93□□□□□ -0.34
DUX4Q9UBX2 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 AC113367.3-201ENST00000508316 1912 ntBASIC12.92□□□□□ -0.34
DUX4Q9UBX2 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 AC087499.6-201ENST00000411576 835 ntBASIC12.92□□□□□ -0.34
DUX4Q9UBX2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 RRP7BP-205ENST00000566851 833 ntBASIC12.92□□□□□ -0.34
DUX4Q9UBX2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 WASH3P-207ENST00000560956 1394 ntBASIC12.92□□□□□ -0.34
DUX4Q9UBX2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms