Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHACTR1Q9C0D0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 AC135782.3-201ENST00000562782 2105 ntBASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 AL035414.1-201ENST00000451327 857 ntBASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 AC106820.3-201ENST00000561653 397 ntBASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 AC008825.2-201ENST00000603374 718 ntBASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 AJ011932.1-201ENST00000621707 465 ntBASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 CU634019.7-201ENST00000624153 1185 ntBASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 FP236241.2-201ENST00000624906 1185 ntBASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 AC009474.1-201ENST00000455096 1565 ntBASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.8□□□□□ -0.04
PHACTR1Q9C0D0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHACTR1Q9C0D0 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.79□□□□□ -0.04
PHACTR1Q9C0D0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
PHACTR1Q9C0D0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHACTR1Q9C0D0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHACTR1Q9C0D0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PHACTR1Q9C0D0 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHACTR1Q9C0D0 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHACTR1Q9C0D0 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms