Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0A1Q93050 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0A1Q93050 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ATP6V0A1Q93050 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0A1Q93050 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0A1Q93050 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0A1Q93050 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0A1Q93050 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ATP6V0A1Q93050 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP6V0A1Q93050 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 AL390755.1-201ENST00000623716 2027 ntBASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 OR2K2-202ENST00000374428 1038 ntBASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 OR2R1P-201ENST00000441404 914 ntBASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 NOC2LP1-201ENST00000450578 752 ntBASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 AC018635.2-201ENST00000608625 364 ntBASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 AC007718.1-201ENST00000621078 280 ntBASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 FAM90A2P-201ENST00000511144 1395 ntBASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 FAM90A25P-201ENST00000528404 1395 ntBASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A1Q93050 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 AC026320.2-201ENST00000434379 478 ntBASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 RN7SL67P-201ENST00000492147 296 ntBASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 AC073352.2-201ENST00000609385 439 ntBASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 MEG3_2.1-201ENST00000611456 105 ntBASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A1Q93050 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms