Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC17.29■□□□□ 0.36
SNED1Q8TER0 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.29■□□□□ 0.36
SNED1Q8TER0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNED1Q8TER0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SNED1Q8TER0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SNED1Q8TER0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.28■□□□□ 0.36
SNED1Q8TER0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 UROS-201ENST00000368774 744 ntTSL 2 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 SLC25A15P3-201ENST00000505530 290 ntBASIC17.28■□□□□ 0.36
SNED1Q8TER0 RN7SKP155-201ENST00000516031 288 ntBASIC17.28■□□□□ 0.36
SNED1Q8TER0 IGHEP2-201ENST00000519308 1256 ntBASIC17.28■□□□□ 0.36
SNED1Q8TER0 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 AC126755.5-201ENST00000622756 267 ntBASIC17.28■□□□□ 0.36
SNED1Q8TER0 AC005274.1-201ENST00000623460 802 ntBASIC17.28■□□□□ 0.36
SNED1Q8TER0 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SNED1Q8TER0 FGD5P1-202ENST00000614866 2498 ntBASIC17.28■□□□□ 0.36
SNED1Q8TER0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNED1Q8TER0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNED1Q8TER0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SNED1Q8TER0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SNED1Q8TER0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.27■□□□□ 0.36
SNED1Q8TER0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
SNED1Q8TER0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNED1Q8TER0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SNED1Q8TER0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNED1Q8TER0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SNED1Q8TER0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNED1Q8TER0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNED1Q8TER0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNED1Q8TER0 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNED1Q8TER0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNED1Q8TER0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNED1Q8TER0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNED1Q8TER0 CICP14-201ENST00000629111 2732 ntBASIC17.27■□□□□ 0.36
SNED1Q8TER0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNED1Q8TER0 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNED1Q8TER0 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNED1Q8TER0 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNED1Q8TER0 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
SNED1Q8TER0 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.27■□□□□ 0.35
SNED1Q8TER0 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC17.27■□□□□ 0.35
SNED1Q8TER0 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC17.27■□□□□ 0.35
SNED1Q8TER0 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC17.27■□□□□ 0.35
SNED1Q8TER0 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNED1Q8TER0 AC092896.1-201ENST00000465850 380 ntBASIC17.27■□□□□ 0.35
SNED1Q8TER0 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC17.27■□□□□ 0.35
SNED1Q8TER0 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNED1Q8TER0 FTLP5-201ENST00000586853 534 ntBASIC17.27■□□□□ 0.35
SNED1Q8TER0 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.27■□□□□ 0.35
SNED1Q8TER0 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC17.27■□□□□ 0.35
SNED1Q8TER0 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNED1Q8TER0 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC17.27■□□□□ 0.35
SNED1Q8TER0 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC17.27■□□□□ 0.35
SNED1Q8TER0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNED1Q8TER0 MTHFR-210ENST00000641407 2387 ntBASIC17.27■□□□□ 0.35
SNED1Q8TER0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.27■□□□□ 0.35
SNED1Q8TER0 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNED1Q8TER0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNED1Q8TER0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.27■□□□□ 0.35
SNED1Q8TER0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNED1Q8TER0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNED1Q8TER0 FKBP4P8-201ENST00000610931 1369 ntBASIC17.27■□□□□ 0.35
SNED1Q8TER0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.27■□□□□ 0.35
SNED1Q8TER0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNED1Q8TER0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms