Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CERKLQ49MI3 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CERKLQ49MI3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 AC104506.1-201ENST00000609247 429 ntBASIC16.9■□□□□ 0.3
CERKLQ49MI3 AC087392.5-201ENST00000612517 489 ntBASIC16.9■□□□□ 0.3
CERKLQ49MI3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CERKLQ49MI3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CERKLQ49MI3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CERKLQ49MI3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CERKLQ49MI3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CERKLQ49MI3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CERKLQ49MI3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CERKLQ49MI3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.9■□□□□ 0.3
CERKLQ49MI3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CERKLQ49MI3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CERKLQ49MI3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CERKLQ49MI3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CERKLQ49MI3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.89■□□□□ 0.29
CERKLQ49MI3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CERKLQ49MI3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.89■□□□□ 0.29
CERKLQ49MI3 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CERKLQ49MI3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.89■□□□□ 0.29
CERKLQ49MI3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 AC079112.1-201ENST00000454972 939 ntBASIC16.89■□□□□ 0.29
CERKLQ49MI3 MRPL22P1-201ENST00000505398 616 ntBASIC16.89■□□□□ 0.29
CERKLQ49MI3 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.89■□□□□ 0.29
CERKLQ49MI3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.89■□□□□ 0.29
CERKLQ49MI3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.89■□□□□ 0.29
CERKLQ49MI3 DNM1P30-201ENST00000563586 452 ntBASIC16.89■□□□□ 0.29
CERKLQ49MI3 RPL17P45-201ENST00000586289 509 ntBASIC16.89■□□□□ 0.29
CERKLQ49MI3 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CERKLQ49MI3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CERKLQ49MI3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CERKLQ49MI3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 RN7SL8P-201ENST00000461771 266 ntBASIC16.88■□□□□ 0.29
CERKLQ49MI3 ORAOV1P1-201ENST00000503108 395 ntBASIC16.88■□□□□ 0.29
CERKLQ49MI3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 AP001184.1-201ENST00000637936 376 ntBASIC16.88■□□□□ 0.29
CERKLQ49MI3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CERKLQ49MI3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CERKLQ49MI3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms