Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SMIM11AP58511 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM11AP58511 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SMIM11AP58511 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM11AP58511 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.46□□□□□ -0.25
SMIM11AP58511 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SMIM11AP58511 CLUHP2-201ENST00000426660 1303 ntBASIC13.46□□□□□ -0.25
SMIM11AP58511 FKBP4P6-201ENST00000457486 1332 ntBASIC13.46□□□□□ -0.25
SMIM11AP58511 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM11AP58511 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SMIM11AP58511 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.46□□□□□ -0.25
SMIM11AP58511 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.46□□□□□ -0.25
SMIM11AP58511 METTL21AP1-201ENST00000438852 635 ntBASIC13.46□□□□□ -0.25
SMIM11AP58511 AL162726.2-201ENST00000438986 1017 ntBASIC13.46□□□□□ -0.25
SMIM11AP58511 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.46□□□□□ -0.25
SMIM11AP58511 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 AC022137.2-201ENST00000503482 481 ntBASIC13.46□□□□□ -0.25
SMIM11AP58511 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.46□□□□□ -0.25
SMIM11AP58511 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.46□□□□□ -0.25
SMIM11AP58511 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM11AP58511 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM11AP58511 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM11AP58511 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM11AP58511 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM11AP58511 AC009118.2-201ENST00000613275 655 ntBASIC13.46□□□□□ -0.25
SMIM11AP58511 AC138466.3-201ENST00000619983 221 ntBASIC13.46□□□□□ -0.25
SMIM11AP58511 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SMIM11AP58511 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
SMIM11AP58511 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM11AP58511 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SMIM11AP58511 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM11AP58511 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SMIM11AP58511 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM11AP58511 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM11AP58511 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM11AP58511 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.46□□□□□ -0.26
SMIM11AP58511 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM11AP58511 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
SMIM11AP58511 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
SMIM11AP58511 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM11AP58511 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM11AP58511 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM11AP58511 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
SMIM11AP58511 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM11AP58511 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM11AP58511 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM11AP58511 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM11AP58511 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
SMIM11AP58511 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
SMIM11AP58511 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.46□□□□□ -0.26
SMIM11AP58511 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SMIM11AP58511 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SMIM11AP58511 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SMIM11AP58511 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.45□□□□□ -0.26
SMIM11AP58511 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.45□□□□□ -0.26
SMIM11AP58511 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.45□□□□□ -0.26
SMIM11AP58511 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.45□□□□□ -0.26
SMIM11AP58511 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 MEX3B-202ENST00000558133 4333 ntBASIC13.45□□□□□ -0.26
SMIM11AP58511 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 AL157996.1-201ENST00000624684 2299 ntBASIC13.45□□□□□ -0.26
SMIM11AP58511 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.45□□□□□ -0.26
SMIM11AP58511 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM11AP58511 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms